Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0421 ATGGCTGCTTATTCTTCAGTATCTGCCTCTCTTTTGCTCATCTTCTTCCTCCTCTTTGGTCTCTCTGTAGCCAGGGAAATACTGGTTGGAGGTAAGACTGATGCTTGGAGGATTCCAGCCTCTGAATCAGACTCACTTAACCAATGGGCACAAAGATCTCGTTTCCAAGTTGGGGACTTTCTTGTTTGGAAATATGATGGTGGGAAAGACTCAGTTTTGGAAGTGAGCAAAGAGGACTACGCAAACTGCAGCATCTCAAACCCATTAAAGGTGTACAGTGATGGAACCACCAAGGTGAAACTTGACCATCCTGGGCCATTCTACTTCATCAGTGGGGCAAAGGGCCACTGTGAGAAGGGTCAGAAGCTTGTTGTGGTAGTTTTGACTCCAAGGGGAAGGTCCAGTGGCGTTGTTTCTTCACCAGCACCTGCTCCTGCACCTTCTTCTGCTGAGTTTGAAGGTCCTGCTGTTGCTTCTGCACCTCTTAGCAGTGCCACTGTTTTGCATGGGGGCATTGTGATGGTGGCCCTGGGAATGGTTGCTATGTGGGGGTTTTCTATGTGA 564 0.4858 MAAYSSVSASLLLIFFLLFGLSVAREILVGGKTDAWRIPASESDSLNQWAQRSRFQVGDFLVWKYDGGKDSVLEVSKEDYANCSISNPLKVYSDGTTKVKLDHPGPFYFISGAKGHCEKGQKLVVVVLTPRGRSSGVVSSPAPAPAPSSAEFEGPAVASAPLSSATVLHGGIVMVALGMVAMWGFSM* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0421 187 PANTHER BLUE COPPER PROTEIN 9 146 IPR039391 GO:0009055
Pvu1g0421 187 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Pvu1g0421 187 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Pvu1g0421 187 PANTHER EARLY NODULIN-LIKE PROTEIN 3 9 146 - -
Pvu1g0421 187 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Pvu1g0421 187 CDD OsENODL1_like 25 128 IPR041846 -
Pvu1g0421 187 Gene3D - 23 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0421 Pvu-Chr1 4211781 4213133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0421 13 177 Phytocyanin Superfamily AT2G25060 57.229 5.26e-60 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0421 - - gmx:100305787 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0421 1 4211781 4213133 Pvu1g0421 1 4211781 4213133 ECH
Pvu1g0421 1 4211781 4213133 Pvu9g0890 9 13590120 13590991 PCT