Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0419 ATGGGAACAAATCTCAGCTCTCCCAAAACTGAAAAGTCTTCCGATGATGGTGAAAACGACCATCTTGGATATGGTTTATCATCTATGCAAGGCTGGCGTGCATCAATGGAAGATGCACATGCTGCACATCTTGATCTGGATGCATCCACTTCCTTTTTCGGAGTTTATGATGGTCATGGAGGTAAGGTGGTTGCTAAGTTTTGTGCTAAGTATCTTCACCAACAGGTGGTGAAGAGTGAAGCATACATAGCTGGAGATATAGGAACCTCTCTTCGGGAATCATTTTTCAGGATGGATGAGATGATGCGTGGTCAAAGGGGCTGGAGGGAATTAGCAATTTTGGGTGATAAGTTCAACAAGTTCAATGGTAAGATAGAAGGATTGATTTGGTCTCCACGAAGCAGAGAATATAAGGCTCAAGAGGATAGTTGGGCCTTTGAGGAGGGTCCTCATTCTAATTTTGCTGGACCAACTTCAGGAAGCACTGCATGTGTTGCAATTATCAGAAACAAGCAACTTTTTGTAGCAAATGCTGGTGATTCACGTTGTGTAATATGTAGGAAGGGTCAGGCCTATGATTTGTCTATAGATCATAAACCTGATGTTGAGACTGAGAAGGAAAGAATCATAAAAGCTGGTGGTTTTATTCATGCAGGACGAGTTAATGGGAGTTTAAGCCTTGCAAGAGCTATAGGTGATATGGAGTTTAAGCAGAATAGATTCCTTCCTGCTGAAAAACAAATGGTGACAGCCAATCCAGACATAAATACTATTGAACTTTGTGATGAAGATGAATTTATAGTGCTAGCTTGTGATGGCATATGGGATTGCTTGTCAAGCCAACAATTGGTTGATTTCGTACGTCAACAACTTCTCATTGAAACTAAACTTTCTGCGGTTTGTGAAAGAGTACTTGATCGATGTTTGTCACCAACAATAGCTTTTGGTGATGGATGTGATAACATGACCATGATTTTAGTTCAGTTCAAAAAACTGGCCCAGTTCACTGCACCAACACAAGAACAATCATCTTCAAATGAATAA 1044 0.4061 MGTNLSSPKTEKSSDDGENDHLGYGLSSMQGWRASMEDAHAAHLDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVVKSEAYIAGDIGTSLRESFFRMDEMMRGQRGWRELAILGDKFNKFNGKIEGLIWSPRSREYKAQEDSWAFEEGPHSNFAGPTSGSTACVAIIRNKQLFVANAGDSRCVICRKGQAYDLSIDHKPDVETEKERIIKAGGFIHAGRVNGSLSLARAIGDMEFKQNRFLPAEKQMVTANPDINTIELCDEDEFIVLACDGIWDCLSSQQLVDFVRQQLLIETKLSAVCERVLDRCLSPTIAFGDGCDNMTMILVQFKKLAQFTAPTQEQSSSNE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0419 347 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 337 - -
Pvu1g0419 347 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Pvu1g0419 347 Gene3D - 1 330 IPR036457 -
Pvu1g0419 347 MobiDBLite consensus disorder prediction 1 20 - -
Pvu1g0419 347 CDD PP2Cc 23 329 IPR001932 -
Pvu1g0419 347 SMART PP2C_4 11 327 IPR001932 -
Pvu1g0419 347 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Pvu1g0419 347 Pfam Protein phosphatase 2C 141 311 IPR001932 -
Pvu1g0419 347 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Pvu1g0419 347 PANTHER PROTEIN PHOSPHATASE 2C 1 337 IPR015655 GO:0004722|GO:0006470
Pvu1g0419 347 SUPERFAMILY PP2C-like 4 331 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0419 Pvu-Chr1 4191175 4198491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0419 1 331 PP2C-type Phosphatase Gene Family AT2G25070 77.039 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0419 K17499 - gmx:100793667 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0419 1 4191175 4198491 Pvu1g0419 1 4191175 4198491 ECH
Pvu1g0419 1 4191175 4198491 Pvu9g0887 9 13564144 13576063 PCT