Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0414 ATGAACCCTGCTAAAAATAACTATCGACAACAAGAACAAACTTATTCATTCTTGCAAACAAATCCACTTTTGTTATTGTTCTTCTCTCAGTTCTTAGCTCCGGCAAAAGTTGAGAAAAAAAAACTGCCATTGAGAATGAGATTTGCAGACATGGTGACCATTTTTGTTCTATTCTTGGCCATTCCTTCTCCTTTCCTTAAAACAGTGGAATCACTAAATTTCAACATTACAAACTTCGATGACCCTGAGAGTGCAAAAAACATGGCATACATGGGTGACGGCAAACCAAAGAACGGTTCCATAGACCTCAACATAGTCTCGTATTATTTCCGTGTTGGGAGAGCCTTGTATGCACAACCTTTGCACCTTTGGGATTCATCTTCAAGTGTTGTAACAGACTTCACCACACGCTTCACCTTTTCTATTGAAAAAGGAAACGATGATACCGCTAGCTACGCTGATGGTTTCGCCTTCTACATAGCCCCTCACGGCTATCAGATTCCTCCAAATGGTGCAGGTGGCACTTTTGGCCTTTTCAATGGCACTTTCAACAGCTTCCTTCCCCAAAATCGCATCCTTGCGGTTGAGTTTGACACACTTAATGGCACCATTGACCCTCCCATGCAGCACGTTGGCATAGATGATAACTCCCTCAAATCCGCGACTACTGGCAAGTTTGACATCGACGAAAATCTGGGAAAGAAATGTAACGCTTTGGTAACCTACAATGCTTCCGACAAGACACTCTTTGTGGCTTGGTCCTTCAACGGAACCGCAACGATACACTCCAATTCTTCACTTTCTTACAAGATCGACCTCTTGAGAACTCTACCCGAGTGGGTTGATGTTGGGTTCTCTGCTTCCACCGGCGAGCTCACTGAACGAAACCTCATTCACTCGTGGGAGTTCAGTTCCACGTTGAATTCTTCCACGGCTTCCAATGATAATCCCTCTGGTGGCAATGAGAAGAGCGGGAAAGGGTTGAGCAAGGTTATGATTGTTGTTGTGGGGACGTGTTTTATGGTTTTTGTGGCCGTGGCAGCAAATGTTGCAGCTTGGATAATAATCATGAAGAAGAGAAGGGGTAAGAATGATTGTGGTTATGATGATGGTGGTAAAGGTAGGTCTGCTAGGTTTAATCTGGACAGGGAAACTCTACCAAGAAGGTTTGATTACACAGAACTAGTTGAAGCCACCAAAGGGTTTGCTGATGAAGCAAGGCTTGGAAGAGGAGGCTCGGGACAGGTTTACAAAGGGGTTCTGAGCTATTTTGGAAGGGTTGTTGCTGTGAAAAGGATTTTCACCAACTTTGAAAATTCAGAGAGGGTTTTCATCAACGAGGTTAGGATCATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGGTGGTGCCACGAGCAAGGAGAGTTTCTGTTGGTTTTTGATTACATGCCTAATGGAAGCCTCGACACTCATCTCTTCGGTGACAAAAAACCTTTGGCCTGGGATATTAGGTACAAGGTAGCATTAGGCGTGGCTTTGGCACTTCGTTATCTTCATGAGGATGCCGAACAGAGTGTTCTTCATAGGGATATTAAGTCGGCTAATGTGTTGCTGGACACAGATTTTAGCACGAAGCTTGGAGATTTTGGGATGGCCAAGTTGGTGGATCCAAGGTTGAAGACTCAGAGGACAGGAGTGGTGGGGACTTACGGGTACCTTGCCCCAGAATACATGAATGGAGGTAGGGCTAGCAAGGAATCAGACATGTATAGTTTTGGTGTTGTGGCTCTTGAAATTGCATGTGGAAGAAGGACTTATCTGGATGGGGAGTTTCATATACCTCTGATGAACTGGGTGTGGCAACAGTATGTGGAAGGGAATGTGATGGATGTTGTTGATGAGAGATTGAACATGGAGTTTGATGTGGATGAAATGAGAAGCTTGATCATTGTGGGGTTGTGGTGCACTAACCCTAACGACAAGGAAAGGCCAAAGGCAGCACAAGTAATAAAAGTTCTTGAGCTTGAAGCACCATTGCCAGAGCTTCCACTTGATATGCATGATCGTCCTCCTCTTTCTCTAAGTACTTATAATCATGCACAACCCACTCATAATTCCTTACAATCACTACCCTTCACTAACAGTTTTGTCACTATTGGACGTTAA 2154 0.4429 MNPAKNNYRQQEQTYSFLQTNPLLLLFFSQFLAPAKVEKKKLPLRMRFADMVTIFVLFLAIPSPFLKTVESLNFNITNFDDPESAKNMAYMGDGKPKNGSIDLNIVSYYFRVGRALYAQPLHLWDSSSSVVTDFTTRFTFSIEKGNDDTASYADGFAFYIAPHGYQIPPNGAGGTFGLFNGTFNSFLPQNRILAVEFDTLNGTIDPPMQHVGIDDNSLKSATTGKFDIDENLGKKCNALVTYNASDKTLFVAWSFNGTATIHSNSSLSYKIDLLRTLPEWVDVGFSASTGELTERNLIHSWEFSSTLNSSTASNDNPSGGNEKSGKGLSKVMIVVVGTCFMVFVAVAANVAAWIIIMKKRRGKNDCGYDDGGKGRSARFNLDRETLPRRFDYTELVEATKGFADEARLGRGGSGQVYKGVLSYFGRVVAVKRIFTNFENSERVFINEVRIISRLIHRNLVQFVGWCHEQGEFLLVFDYMPNGSLDTHLFGDKKPLAWDIRYKVALGVALALRYLHEDAEQSVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLKTQRTGVVGTYGYLAPEYMNGGRASKESDMYSFGVVALEIACGRRTYLDGEFHIPLMNWVWQQYVEGNVMDVVDERLNMEFDVDEMRSLIIVGLWCTNPNDKERPKAAQVIKVLELEAPLPELPLDMHDRPPLSLSTYNHAQPTHNSLQSLPFTNSFVTIGR* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0414 717 Pfam Protein kinase domain 404 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0414 717 CDD STKc_IRAK 408 670 - -
Pvu1g0414 717 ProSitePatterns Legume lectins beta-chain signature. 193 199 IPR019825 -
Pvu1g0414 717 ProSitePatterns Legume lectins alpha-chain signature. 277 286 IPR000985 -
Pvu1g0414 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Pvu1g0414 717 Gene3D Phosphorylase Kinase; domain 1 377 478 - -
Pvu1g0414 717 SUPERFAMILY Concanavalin A-like lectins/glucanases 70 309 IPR013320 -
Pvu1g0414 717 CDD lectin_legume_LecRK_Arcelin_ConA 72 307 IPR001220 GO:0030246
Pvu1g0414 717 ProSiteProfiles Protein kinase domain profile. 402 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0414 717 PANTHER - 71 685 - -
Pvu1g0414 717 PANTHER LECTIN RECEPTOR KINASE 71 685 - -
Pvu1g0414 717 ProSitePatterns Protein kinases ATP-binding region signature. 408 431 IPR017441 GO:0005524
Pvu1g0414 717 SUPERFAMILY Protein kinase-like (PK-like) 385 696 IPR011009 -
Pvu1g0414 717 Gene3D - 69 319 - -
Pvu1g0414 717 SMART serkin_6 402 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0414 717 Gene3D Transferase(Phosphotransferase) domain 1 479 684 - -
Pvu1g0414 717 Pfam Legume lectin domain 71 315 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0414 Pvu-Chr1 4147723 4152276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0414 49 682 Receptor kinase-like Gene Family AT5G10530 42.702 5.12e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu1g0414 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0414 - - gmx:100305427 1050.43