Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0413 ATGTTAGCTACCTCAAAAAATTCCCACTACTTCGGAAGTTTTCTTCTTCTGCTTATCCTTCCAAGAACTATAGCTCAACCATTTTCCTTCAGCATAACTAACTTTGACGACACTGAAAACGCAGGCCTCATTGGATACGCAGGCGTAGCCAAGATTTTGAACGGAAGCATACAACTCAACTCACTCATCTATAGTGGAATTGGAAGAGCAATCTATGGCCAACCACTACACCTCAAAAACTCTTCTAACGGAAAACTCACTGATTTTTCAACTCGTTTTTCATTCACTATCCAATCCCCTGACACCATTTACGGTGACGGATTTGGCTTCTACGTCGCACCTCTTTCCTACCAGATTCCGAACACCATGATAGCTGGTTCCGGTCTCGGCCTATACTATGAAAACATACCCATACTTGCTGTCGAATTTGACACTTTTATAAACGACTTGGACCCTCCAATGCAGCACGTAGGGATCAACAATGGCTCTGTGGTATCTCTCAATTATACCAAGTTTGATATTGAGAGCAACAAAGGGAACATGGGACATGCCTTGATAACTTACAATGCTTCTGCCAAACTCATTGCTGTCTCGTGGTTCTTCGATGGAAGTAGTTCCGCTTCTACTCCTAACGCTTATCTTTCCTACCAGATCGACCTAGCGGAACTTCTACCGGAGTGGGTCGCTATTGGTTTTTCAGGTTCAACCGGATCATCCATTGAGGAAAATGTTATCCATTCATGGGAATTCAGTTCTAGTCTAGATCTAATAAATTTCACACATAGAGAAGCAAACAAAGAAATTGTTTTCACAACAGAATACAAGGGTAGGGAAAAAGTAGTGGCTGTTGCAGTGATTTGGTCTATTATATTTGCGCTCGTGGTTATTAGTATTACGTGTTGGATGATGAAGAAGAGAAGAAACGAGGATGGATTTTGTTTTGACAGAGAAGCTACGCCTAGAAGGTTTGGTTATAACGAATTGGTTGCAGCCACCAACGGGTTTGCAGATGATAGAAGGCTTGGAGAAGGTGGGCATGGACAAGTTTACAAAGGGTTTCTGAGTGATTTAGGGCGTGTGGTGGCGGTGAAATGGATTTCTTCAGACGTGGAAGATTCGGAGAGAATATTTAGAAACGAAGTGAAGATTATAAGCAGGCTTATACATAAAAACCTTGTGCAGTTCATTGGGTGGTGCCAGGAGGAAGGGAAGTTGTTTCTAGTTATGGATTACTTAGATAATGGAAGCCTTGAGACTCATCTCTTTGGGAACAGAAGGAGTTTGACATGGGGTGTGAGATATAGCATAGCATTAGGTGTGGTGAGAGCACTTGGTTATCTCCATGAAGACGTGGAGCAGTGTGTTCTTCACAGGGATATCAAGGCAGGTAATGTTTTGTTAGACAGGGATTTCAATGCTAAGCTTAGTGATTTTGGAATGGCGAAGTTGGTGGATCCAAGATTGAGGAGTGAGAAGACAAGGGTGGTGGGGACATATGGGTACCTGGCCCCTGAATATGTGAAGGAAGGAAGGGCTAGCAAGGAATCAGACATGTACGGTTTTGGGGTGTTGGCTTTGGAAATAGCATGTGGAAGAAGGACTTTGAGGAATTGGGTATGGAAACATTATGTGGATGGAAAGATTTTGAATGCTGCTGATGAGAAATTGAAGAAAGATTTTGATGTGAGTGAAATGACATGTTTGCTCACTGTGGGAATATGGTGTACCCTGGAAGATCACAAAGAAAGACCAACAGCAGAAGAGGTCATTAATGTTCTTAAACAAAATGTGTCGTTGCCAATACTTTCTGCTAAACATCCATGA 1824 0.4238 MLATSKNSHYFGSFLLLLILPRTIAQPFSFSITNFDDTENAGLIGYAGVAKILNGSIQLNSLIYSGIGRAIYGQPLHLKNSSNGKLTDFSTRFSFTIQSPDTIYGDGFGFYVAPLSYQIPNTMIAGSGLGLYYENIPILAVEFDTFINDLDPPMQHVGINNGSVVSLNYTKFDIESNKGNMGHALITYNASAKLIAVSWFFDGSSSASTPNAYLSYQIDLAELLPEWVAIGFSGSTGSSIEENVIHSWEFSSSLDLINFTHREANKEIVFTTEYKGREKVVAVAVIWSIIFALVVISITCWMMKKRRNEDGFCFDREATPRRFGYNELVAATNGFADDRRLGEGGHGQVYKGFLSDLGRVVAVKWISSDVEDSERIFRNEVKIISRLIHKNLVQFIGWCQEEGKLFLVMDYLDNGSLETHLFGNRRSLTWGVRYSIALGVVRALGYLHEDVEQCVLHRDIKAGNVLLDRDFNAKLSDFGMAKLVDPRLRSEKTRVVGTYGYLAPEYVKEGRASKESDMYGFGVLALEIACGRRTLRNWVWKHYVDGKILNAADEKLKKDFDVSEMTCLLTVGIWCTLEDHKERPTAEEVINVLKQNVSLPILSAKHP* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0413 607 Gene3D Phosphorylase Kinase; domain 1 320 411 - -
Pvu1g0413 607 Pfam Legume lectin domain 29 253 IPR001220 GO:0030246
Pvu1g0413 607 PANTHER LECTIN RECEPTOR KINASE 36 604 - -
Pvu1g0413 607 SMART serkin_6 335 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0413 607 PANTHER - 36 604 - -
Pvu1g0413 607 CDD lectin_legume_LecRK_Arcelin_ConA 28 254 IPR001220 GO:0030246
Pvu1g0413 607 ProSitePatterns Legume lectins alpha-chain signature. 224 233 IPR000985 -
Pvu1g0413 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Pvu1g0413 607 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 260 IPR013320 -
Pvu1g0413 607 SUPERFAMILY Protein kinase-like (PK-like) 319 595 IPR011009 -
Pvu1g0413 607 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Pvu1g0413 607 Pfam Protein kinase domain 336 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0413 607 ProSiteProfiles Protein kinase domain profile. 335 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0413 607 Gene3D Transferase(Phosphotransferase) domain 1 412 605 - -
Pvu1g0413 607 ProSitePatterns Legume lectins beta-chain signature. 139 145 IPR019825 -
Pvu1g0413 607 Gene3D - 26 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0413 Pvu-Chr1 4145350 4147173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0413 14 607 Receptor kinase-like Gene Family AT5G10530 40.694 2.62e-153 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu1g0413 Pkinase 6.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0413 - - var:108336991 998.423