Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0412 ATGAGGTTGCTAGAGAAGGTTACAGCTTTTGTTCTTCTACTGGCTTTTCATCCTCCTTTCCTTAAAACTGTAGAATCACTAAATTTCAACATAACAAACTTCAACGACCCTGAGAGTGAAAAAACCATGGCATACGTGGGTGATGGCCAAGCCACCAACGGCACCATACAACTCAACATTGTGGACTATCTTTACCGCGTTGGAAGAGCTTTGTACGCAAAACCTCTGCACCTGTGGGACGCATCTTCGAGTGTTCTCACAGACTTCACCACACGCTTCACTTTCACCATTGACAGAGCCACCAACGGTACCTATGCTGACGGTTTCGCCTTCTACATGGCCCCTCATGGCTACCAGATTCCTCCCAACGCAGCTGGTGGCACTTTTGCCCTATTCAACACCACCTCCAACACCTTTATTCCCCATAACCACGTCCTCGCGGTTGAGTTTGACACACTTAATGGCACCATTGACCCACCCATGCAGCACGTTGGCATAGACGATAACTCGCTCAAATCCGTGGCTTTTGCCAAGTTAGACATTGACAAAAACCTGGGAAAGAAATGTAACGTTTTGATAACCTACACTGCTTCCGACAAGACCCTCTTTGTGGCTTGGTCCTTCAACGGAACGGCAAATTCACACTCCAATTCTTCACTTTCTTACAAGATTGACCTCATGGAAATTCTACCCGAGTGGGTGGATGTTGGGTTCTCTGCTTCAACAGGCGACTTAACTGAGCACAACGTTATTTACTCGTGGGAGTTTAGTTCAACGTTGAATTCCGATGCTATGGACAATTCCTCCGGTGAGGGGAACCGAAAACAAAACGTTTTGGTAGTTGCTGTGGCGACTTCTTCAACGGTCTTGGTGGTCGTGGTTGCGAGTATTGCAGTTTGGATCATGATCAGGAGGAAAAGAAGGGATAAGGTTGATACGAGTAATGAGGGTGAAGGTGGAGCCAACTCGGTTAAGTTTGACTTGGATAGGGCAACTATACCACGAAGGTTTGATTACAAAGAACTAGTTGCAGCCACCAACGAATTCGCAGATGACAGAAAGCTTGGACGAGGAGCCTCGGGACAGGTTTACAAAGGGCTTCTGAGTTATTTAGGAAGGCTTGTTGCTGTGAAAAGGATTTTTGCTAACTTCGGAAATTCAGAGAGAGTTTTCATCAATGAGGTTAGGGTTATAAGCCGTCTTATACACAGAAACTTGGTCCAGTTCGTAGGGTGGTGCCACGAGGAAGGTGAGTTTTTGTTGCTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGACAAAAAACCTTTGACCTGGGATGTTAGGTACAAGGTAGCATTAGGAGTGGCTGCAGCAGTTCGTTATCTTCATGAAGATGCGGAGCAGTGTGTTCTTCACAGGGATATTAAGTCAGCAAATGTGTTGTTGGACACTGATTTTAGCACAAAGCTTGGAGATTTTGGAATGGCAAAGTTTGTGGATCCAAGGTTGAGGACTCAAATGACAGGAGTGGTGGGGACATACGGTTACCTTGCCCCGGAATATATCAACGGAGGTAGGGCTAGTAAGCAATCAGACATTTATAGTTTTGGGGTAGTGGCTCTTGAGATTGCATGTGGAAGGAGGACTTACAAAGATGGAGAGTTTCATGTGCCTCTCACGAACTGGGTGTGGCAGCATTATGTGGAAGGGAATGTGATGGATGTTGTTGATGAGAGATTGAACAAGGAGTTTGATGTGGATGAAATGAGAAGCTTGATCATTGTGGGGTTGTGGTGTACTAACCCTAATGACAAGGAAAGGCCAAAGGCTGCACAAGTAATAAAAGTTCTTGAGCTAGAAGCGCCATTGCCAGAGCTTCCACTTGATATGCATGACCATCTTCCTCTAGTTACAGATTCACAACAAATTAATTCTCAGTCCATGCAGTCGCTACCTTTCACTCACAGCTTTATAACTGTTGGACGTTAG 1986 0.4557 MRLLEKVTAFVLLLAFHPPFLKTVESLNFNITNFNDPESEKTMAYVGDGQATNGTIQLNIVDYLYRVGRALYAKPLHLWDASSSVLTDFTTRFTFTIDRATNGTYADGFAFYMAPHGYQIPPNAAGGTFALFNTTSNTFIPHNHVLAVEFDTLNGTIDPPMQHVGIDDNSLKSVAFAKLDIDKNLGKKCNVLITYTASDKTLFVAWSFNGTANSHSNSSLSYKIDLMEILPEWVDVGFSASTGDLTEHNVIYSWEFSSTLNSDAMDNSSGEGNRKQNVLVVAVATSSTVLVVVVASIAVWIMIRRKRRDKVDTSNEGEGGANSVKFDLDRATIPRRFDYKELVAATNEFADDRKLGRGASGQVYKGLLSYLGRLVAVKRIFANFGNSERVFINEVRVISRLIHRNLVQFVGWCHEEGEFLLLFEYMPNGSLDTHLFGDKKPLTWDVRYKVALGVAAAVRYLHEDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKFVDPRLRTQMTGVVGTYGYLAPEYINGGRASKQSDIYSFGVVALEIACGRRTYKDGEFHVPLTNWVWQHYVEGNVMDVVDERLNKEFDVDEMRSLIIVGLWCTNPNDKERPKAAQVIKVLELEAPLPELPLDMHDHLPLVTDSQQINSQSMQSLPFTHSFITVGR* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0412 661 SMART serkin_6 349 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0412 661 CDD lectin_legume_LecRK_Arcelin_ConA 27 260 IPR001220 GO:0030246
Pvu1g0412 661 Pfam Legume lectin domain 26 268 IPR001220 GO:0030246
Pvu1g0412 661 Gene3D Transferase(Phosphotransferase) domain 1 426 621 - -
Pvu1g0412 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 260 IPR013320 -
Pvu1g0412 661 Pfam Protein kinase domain 350 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0412 661 PANTHER - 20 632 - -
Pvu1g0412 661 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
Pvu1g0412 661 SUPERFAMILY Protein kinase-like (PK-like) 333 639 IPR011009 -
Pvu1g0412 661 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Pvu1g0412 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Pvu1g0412 661 PANTHER PUTATIVE-RELATED 20 632 - -
Pvu1g0412 661 ProSiteProfiles Protein kinase domain profile. 349 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0412 661 Gene3D Phosphorylase Kinase; domain 1 318 425 - -
Pvu1g0412 661 Gene3D - 24 271 - -
Pvu1g0412 661 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0412 Pvu-Chr1 4124713 4127130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0412 9 629 Receptor kinase-like Gene Family AT5G10530 45.024 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu1g0412 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0412 - - vra:106763732 1134.78