Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0410 ATGAGGTTGCTAGAGAAGGTTACAACTTTTGTTCTTCTACTCGCTCTTCATCCTCCTTTCCTTAAAACTGTAGAATCATTAAATTTCAACATAACAAACTTCAACGACCCTGAGAGTGAAAAAACCATGGCATACGTGGGTGATGGCCAAGCCACCAACGGCACCATACAACTCAACATTGTGGACTATCTTTTCCGCGTTGGAAGAGCCTTGTACGCAAAACCTCTGCACCTGTGGGACGCCTCTTCGAGTGTTCTCACAGACTTCACCACACGCTTCACTTTCACCATTGACAGAGCCACCAACGGCACCTATGCTGACGGTTTCGCCTTCTACATGGCCCCTCATGGCTACCAGATTCCTCCCAACGCAGCTGGTGGCACTTTTGCCCTTTTCAACACCACCTCTAATACCTTTATTCCCCATAACCACGTCCTCGCCGTTGAGTTTGACACACTTAATGGCACCATTGACCCTCCCATGCAGCACGTTGGCATAGACGATAACTCGCTCAAATCCGTGGCTTTTGCCAAGTTAGACATTGACAAAAACCTGGGAAAGAAATGTAACGTTTTGATAACCTACACTGCTTCCAACAAGACCCTCTTTGTGGCTTGGTCCTTCAACGGAACAGCAAATTCACACTCCAATTCTTCACTTTCTTACAAGATTGACCTCATGGAAATTCTACCCGAGTGGGTGGATGTTGGGTTCTCTGCTTCAACAGGCGAATTAACTGAGCACAACATTATTCACTCGTGGCAGTTTAGTTCAACGTTGAATTCCGATGCTACGGATAATTCCTCCGGTGAGGGGAACGGTGGGAACGGAAAACGAAACGTTTTGGTGATTGCTGTGGCGACTACTTCAACGGTCTTGGTGGTCGTGGTTGCGAGTATTGCAGTTTGGGCCATGATCAGGAGGAAAAGAAGGGATACGGTTGATGAGAGTAATGATGGTGAAGGTGGAGCCAACTCGGTTAAGTTTGACTTGGATAGGGCAACTATACCAAGAAGGTTTGATTACAAAGAACTAGTCGCAGCCACCAACGAATTTGCAGATGATAGAAAGCTTGGACGAGGAGGCTCGGGACAGGTTTACAAAGGGCTTCTGAGTGATTTAGGAAGGGTTGTTGCTGTGAAAAGGATTTTCGCCAACTTCGGAAATTCAGAGAGAGTTTTCATCAATGAGGTGAGGGTTATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGGTGGTGCCACGAGGAAGGTGAGTTTTTGTTGCTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGACAAAAAACCTTTGACCTGGGATGTTAGGTACAAGGTAGCATTAGGAGTGGCTGCAGCAGTTCGTTATCTTCATGAAGATGCGGAGCAGTGTGTTCTTCACAGGGATATTAAGTCAGCAAATGTGTTGTTGGACACAGATTTTAGCACAAAGCTTGGAGATTTTGGAATGGCAAAGTTTGTGGATCCAAGGTTGAGGACTCAAATGACAGGGGTGGTGGGGACTTACGGGTACCTTGCCCCAGAATATCTCAACGGAGGTAGGCCTAGTAAGGAATCAGACATTTATAGTTTTGGGGTTGTGGCTCTTGAGATTGCATGTGGAAGGAGGACTTACAAAGATGGAGAGTTTCATGTGCCTCTCACGAACTGGGTGTGGCAACAGTATGTGGAAGGGAATGTGATGGATGTTGTTGATGAGAGATTGAACAAGGAGTTTGATGTGGATGAAATGAGAAGCTTGATCATTGTGGGGTTGTGGTGTACTAACCCTAATGACAAGGAAAGGCCAAAGGCTGCACAAGTAATAAAAGTTCTTGAGCTAGAAGCGCCATTGCCAGAGCTTCCACTTGATATGCATGATCATCTTCCTCTAGTTAAATATTCACCACAAATTAATTCTCAGTGCATGCAGACGCTACCTTTCACTGACAGCTTTACAACTGTTGGACGTTAG 1995 0.4581 MRLLEKVTTFVLLLALHPPFLKTVESLNFNITNFNDPESEKTMAYVGDGQATNGTIQLNIVDYLFRVGRALYAKPLHLWDASSSVLTDFTTRFTFTIDRATNGTYADGFAFYMAPHGYQIPPNAAGGTFALFNTTSNTFIPHNHVLAVEFDTLNGTIDPPMQHVGIDDNSLKSVAFAKLDIDKNLGKKCNVLITYTASNKTLFVAWSFNGTANSHSNSSLSYKIDLMEILPEWVDVGFSASTGELTEHNIIHSWQFSSTLNSDATDNSSGEGNGGNGKRNVLVIAVATTSTVLVVVVASIAVWAMIRRKRRDTVDESNDGEGGANSVKFDLDRATIPRRFDYKELVAATNEFADDRKLGRGGSGQVYKGLLSDLGRVVAVKRIFANFGNSERVFINEVRVISRLIHRNLVQFVGWCHEEGEFLLLFEYMPNGSLDTHLFGDKKPLTWDVRYKVALGVAAAVRYLHEDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKFVDPRLRTQMTGVVGTYGYLAPEYLNGGRPSKESDIYSFGVVALEIACGRRTYKDGEFHVPLTNWVWQQYVEGNVMDVVDERLNKEFDVDEMRSLIIVGLWCTNPNDKERPKAAQVIKVLELEAPLPELPLDMHDHLPLVKYSPQINSQCMQTLPFTDSFTTVGR* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0410 664 CDD lectin_legume_LecRK_Arcelin_ConA 27 260 IPR001220 GO:0030246
Pvu1g0410 664 PANTHER - 20 642 - -
Pvu1g0410 664 SUPERFAMILY Protein kinase-like (PK-like) 336 637 IPR011009 -
Pvu1g0410 664 Gene3D - 24 271 - -
Pvu1g0410 664 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
Pvu1g0410 664 SMART serkin_6 352 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0410 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 260 IPR013320 -
Pvu1g0410 664 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Pvu1g0410 664 PANTHER PUTATIVE-RELATED 20 642 - -
Pvu1g0410 664 Gene3D Phosphorylase Kinase; domain 1 323 428 - -
Pvu1g0410 664 ProSiteProfiles Protein kinase domain profile. 352 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0410 664 Pfam Legume lectin domain 26 267 IPR001220 GO:0030246
Pvu1g0410 664 Pfam Protein kinase domain 353 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0410 664 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Pvu1g0410 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Pvu1g0410 664 Gene3D Transferase(Phosphotransferase) domain 1 429 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0410 Pvu-Chr1 4103754 4106385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0410 9 632 Receptor kinase-like Gene Family AT5G10530 44.497 1.45e-179 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu1g0410 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0410 - - vra:106763732 1129.39