Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0406 ATGACAGACAACAATCCAAGACCACCACCTGATACACCTGACAGTGATGATTTCTGCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGCAATTGGATGATTTTGAGTCTTTTTCTCCTGAGAATAATGTCTCAAACCAGGTTCATCTAAGTGGGTCTGGCGGAAGTGGAAGCTACTTTGAGGGGTCTTCTAACAATCCTAGTGGACGTGAGAATAGGCAAGTTGTTAGAGATAGAGTTGCATTCAAAACAATTTCAGAGATTGAAGTACTAGACGATGGATACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAGAACAACCCCAATCCAAGGAATTACTATAGATGTTCAGTGGATGGATGCTCTGTGAAGAAGAGAGTGGAGAGAGATAAGGATGATCCTAGGTGTGTAATAACAACCTACGAAGGCAGCCACACTCATCCAAGTTCTTCCTAG 459 0.4292 MTDNNPRPPPDTPDSDDFCNQWPFELSEYLQLDDFESFSPENNVSNQVHLSGSGGSGSYFEGSSNNPSGRENRQVVRDRVAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCSVKKRVERDKDDPRCVITTYEGSHTHPSSS* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0406 152 PANTHER WRKY TRANSCRIPTION FACTOR 59-RELATED 18 151 - -
Pvu1g0406 152 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 151 IPR044810 GO:0003700
Pvu1g0406 152 MobiDBLite consensus disorder prediction 38 75 - -
Pvu1g0406 152 SUPERFAMILY WRKY DNA-binding domain 84 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu1g0406 152 MobiDBLite consensus disorder prediction 1 20 - -
Pvu1g0406 152 ProSiteProfiles WRKY domain profile. 86 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0406 152 SMART WRKY_cls 91 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0406 152 MobiDBLite consensus disorder prediction 38 71 - -
Pvu1g0406 152 Gene3D WRKY domain 78 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu1g0406 152 Pfam WRKY DNA -binding domain 92 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0406 Pvu-Chr1 4074888 4076353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0406 79 150 WRKY Transcription Factor Family AT5G26170 81.944 2.02e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu1g0406 WRKY 5.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0406 - - gmx:100796836 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0406 1 4074888 4076353 Pvu1g0406 1 4074888 4076353 ECH