Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0403 ATATGGGTAGCAATAGTAGGGGATTTGGAAATAAAGGAACATGTTCAACTAGGGATTGAATGGCTCCAAGATACCTCGGTACCCGGTACCGGCCAACCACCATATGAAAATGCATTAAGTTTCCTTTATTTCTTTCTTCACATCTTCCAACCCAATCTTGTTCTTCTCGTGTCCTATTGTATCACCCATATCAACCTTAATTTTCTCCGACTCGCGACCATTCCTATTGAAACTTGCAACAGCATGAGTTCGAGTCCAACAACGCACGACGACTCACAACCCCACGCGCCGCAAGAAATAGATTGGCACATGCTCGACAAGTCCAAGTTCTTCTGCCTAGGAACACCCCTCTTCTCCGCCGTCTCCGCCGCCCTCTACCCAGCCGTCGTTTTGAAGACACGTCAGCAAGTGTCCGCCGCCGAAATCTCGTGCCGCCACATGTTGCGCTCCATCATGCGGTACGAGGGTCTCCGAGGTTTCTACCGAGGTTTCGGTACATCCTTAATGGGAACAATCCCCGCACGTGCGCTTTACATGTCGGCGCTCGAAGTCACCAAGAGCAACGTCGCCACCGCCACCGTTCGGTTGGGGTTCTCCGATGCCTCTGCCACTGCAATCGCTAATGCCGCCGGAGGAGTGGCTTCTGCCATGGCAGCACAGTTGGTATGGACCCCAGTTGATGTTGTTAGCCAGAGACTCATGGTACAAGGAGTGTGTTACAGGAATGGTTTTGACGCATTCAGAAAGATTCTGGGTGTGGACGGTCCAAGAGGGTTCTACAGGGGGTTCGGGGTTTCCATCGTCACCTACGCTCCCTCCAACGCGGTTTGGTGGGCTTCGTATTCGATGGTGCACAAGCTCATCTGGGCCACGTTGGGTTCAAAGAACGAGGGTTTGAGCTTGGGATGCGATTCGAGGGTGGTGGTGGGAGTGCAAGGGTTAAGTGCAGTCATGGCAAGTGGGGTTTGTGCAATAGTGACGATGCCAATGGATACGATAAAGACGAGGTTGCAGGTGTTGGACGCAGAGGAAGTGAGTGTTTTGGAGGTGGTAAGAAATTTGGTGAGGGAGGGAGGGATTTTGGCCTGTTACAGAGGGTTGGGACCAAGGTTCGTGTCCATGTCAATGTCTGCAGCCGCCATGATTACTACCTATGAGTTCTTGAAACGTGTGTCGGCTAAGAATGTTGATAGATTAACACTGTACTCAGGCTAG 1215 0.516 IWVAIVGDLEIKEHVQLGIEWLQDTSVPGTGQPPYENALSFLYFFLHIFQPNLVLLVSYCITHINLNFLRLATIPIETCNSMSSSPTTHDDSQPHAPQEIDWHMLDKSKFFCLGTPLFSAVSAALYPAVVLKTRQQVSAAEISCRHMLRSIMRYEGLRGFYRGFGTSLMGTIPARALYMSALEVTKSNVATATVRLGFSDASATAIANAAGGVASAMAAQLVWTPVDVVSQRLMVQGVCYRNGFDAFRKILGVDGPRGFYRGFGVSIVTYAPSNAVWWASYSMVHKLIWATLGSKNEGLSLGCDSRVVVGVQGLSAVMASGVCAIVTMPMDTIKTRLQVLDAEEVSVLEVVRNLVREGGILACYRGLGPRFVSMSMSAAAMITTYEFLKRVSAKNVDRLTLYSG* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0403 404 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 88 397 - -
Pvu1g0403 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 287 IPR018108 -
Pvu1g0403 404 Pfam Mitochondrial carrier protein 123 189 IPR018108 -
Pvu1g0403 404 Pfam Mitochondrial carrier protein 204 288 IPR018108 -
Pvu1g0403 404 Pfam Mitochondrial carrier protein 312 395 IPR018108 -
Pvu1g0403 404 SUPERFAMILY Mitochondrial carrier 104 388 IPR023395 -
Pvu1g0403 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 307 391 IPR018108 -
Pvu1g0403 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 188 IPR018108 -
Pvu1g0403 404 Gene3D Mitochondrial carrier domain 111 399 IPR023395 -
Pvu1g0403 404 PRINTS Mitochondrial carrier protein signature 161 179 IPR002067 GO:0055085
Pvu1g0403 404 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Pvu1g0403 404 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 88 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0403 Pvu-Chr1 4057316 4061042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0403 95 397 Chloroplast and Mitochondria Gene Families AT1G72820 62.310 6.28e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0403 K15121 - gmx:100797365 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0403 1 4057316 4061042 Pvu1g0403 1 4057316 4061042 ECH
Pvu9g0825 9 12929312 12930346 Pvu1g0403 1 4057316 4061042 ECH