Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0399 GTGGAAGATTTGGAAAAGGAAGTGAGAAAGCAAAGAGAAGTAGGAGTGATGTACAAGAGAAAAATGGAAAGAACAGAAGAGTACTTGAGACATTGTCTTGAGATAGCAGAAGAAAATGGAATATTGGATCTGACTCTGAACTACAATGGTGATTCTCAACAATCTCCACTCTCTCTTCACTCCATTTCCAGCCCTCAGATTCCCACTTCTCCACCACACCATGCCCACCACCCCAATCTTGCAACCATTATTCATCAAGCTAAAACCAATGGCTGGTACATTCATCCAAATGAGATTAAATTGGAAGAGAAAATTGGGGAAGGAAGCACCGCAGAGATTCACAGAGGAACATGGCGTGGATTTGAGGTCGCAGTGAAATGCATATCGCAAGACTTTTTCCGTCTAAACCAACACGGCGTCGTTTACTTTTCCCAGGAGCTCGAAACGCTGTCGCGGCAGCGCCACAGGTTCGTGCTTCAGCTCATGGGCGCGTGTATCGAACCTCCCCACCACGCGTGGGTGGTCACGGAGTACCTGAGCACCACGCTGAAGGAGTGGCTCCATGGGCCTGGGAACCGGCGCAGGGAGCGGATGGTGCCACTTCCACCCTTGCAAGAGAGACTGGGCCGGGCCTTGGAAATAGCCCAAGCCATGCAGTACTTGCACGAGCAGAAGCCCAAACTCCTTCACCGCGACTTGAAGCCCAGCAACATATTCCTTGATGACGCCATGCACGTTAGAGTCGCGGATTTTGGCCACGCGCGGTTCTTGGGTGACGAAGAAATGGCCCTAACCGGAGAAACAGGAACATACGTTTACATGGCACCAGAGGTGATCCGAAGTGAACCTTACAATGAAAATTGTGATGTATACAGTTTTGGTATCATACTGAACGAGCTACTAACTGGAAATTACCCTTATGTTGAGACACAATATGGTCCCACCAAGATTGCCATGGAAGTTGTGGAGAATAAGCTTCGACCTAAGCTTCCATGTGATGACGATGATGTTGGAAAACTGAGAGAGCTTCTTCACCTTATTTCTCTTTGTTGGGACCAAAATCCAACAACTCGACCATCCTTTGCCACAATCACTCTTTCTCTCAAAACTTATGCCAACAACAATCTCGTTTAG 1134 0.4797 VEDLEKEVRKQREVGVMYKRKMERTEEYLRHCLEIAEENGILDLTLNYNGDSQQSPLSLHSISSPQIPTSPPHHAHHPNLATIIHQAKTNGWYIHPNEIKLEEKIGEGSTAEIHRGTWRGFEVAVKCISQDFFRLNQHGVVYFSQELETLSRQRHRFVLQLMGACIEPPHHAWVVTEYLSTTLKEWLHGPGNRRRERMVPLPPLQERLGRALEIAQAMQYLHEQKPKLLHRDLKPSNIFLDDAMHVRVADFGHARFLGDEEMALTGETGTYVYMAPEVIRSEPYNENCDVYSFGIILNELLTGNYPYVETQYGPTKIAMEVVENKLRPKLPCDDDDVGKLRELLHLISLCWDQNPTTRPSFATITLSLKTYANNNLV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0399 377 ProSiteProfiles Protein kinase domain profile. 99 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0399 377 ProSitePatterns Protein kinases ATP-binding region signature. 105 126 IPR017441 GO:0005524
Pvu1g0399 377 SMART serkin_6 99 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0399 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Pvu1g0399 377 Gene3D Transferase(Phosphotransferase) domain 1 200 376 - -
Pvu1g0399 377 MobiDBLite consensus disorder prediction 55 77 - -
Pvu1g0399 377 PANTHER OS09G0443600 PROTEIN 8 374 - -
Pvu1g0399 377 MobiDBLite consensus disorder prediction 55 70 - -
Pvu1g0399 377 Gene3D Phosphorylase Kinase; domain 1 77 180 - -
Pvu1g0399 377 SUPERFAMILY Protein kinase-like (PK-like) 70 364 IPR011009 -
Pvu1g0399 377 CDD STKc_MAP3K-like 105 368 - -
Pvu1g0399 377 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 374 - -
Pvu1g0399 377 Pfam Protein kinase domain 101 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0399 Pvu-Chr1 3976303 3980948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0399 89 364 MAP Kinase Kinase Kinase AT2G17700 38.989 1.60e-52 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Pvu1g0399 Pkinase 6.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0399 - - pvu:PHAVU_001G0393001 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0399 1 3976303 3980948 Pvu1g0399 1 3976303 3980948 ECH