Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0388 ATGTTTTTGCTGTCGCTGATGCATCTTACAGGTAAAAGTCAGTCTATCTTGGTCAGCGGCGAAAGTGGTGCTGGAAAAACTGAGACAACAAAATTGATCATGCAGTATCTTACCTTTGTTGGTGGACGTGCTGCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCCAATCCACTTTTAGAGGCATTTGGTAATGCAAGGACTGTTAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTACTGGAAAGATCACGAGTTGTGCAGATAACGGATCCCGAGAGAAATTATCACTGCTTTTATCAGTTGTGTTCATTTGAAAGGGATGCAGAGAAGTACAAGTTAGGACATCCGAGTCACTTCCACTATCTAAATCAAAGTAAAGTCTATGAATTAGATGGTGTACGCAACTCAGAAGAATACCTGAAGACAAGGAGGGCAATGGATATTGTTGGCATTAGTCACGCAGATCAGGAATCCATATTTCGTGTGTTAGCTGCAATTTTACATGTGGGCAACATTGAATTTTCTCCTGGAAAAGAGCATGACTCATCGGCAGTAAAAAATGACAAATCAAGATTTCATTTACAGATGGCTGCTGATCTTTTCATGTGTGATGTAGACCTACTGCTGGCAACATTGTGTACTCGTTCAATACAAACTCGTGAAGGAAGTATCATCAAGGTCCTTGATTGCAATGCTGCTGTTGCTGGCCGTGATGCTTTGGCGAAAACTGTTTATGCCCGTTTATTTGATTGGCTTGTTGATAAGATCAATATGTCTGTTGGGCAAGACATCAATTCCAAGATACAGATTGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAACAGTTTTGAGCAATTTTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAACAGGAGGAGTATGGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTAGATAACCAAGATGTTTTAGAGTTAATTGAAAAGAAACCCATTGGTATCATTGCTCTGTTGGATGAAGCTTGTATGTTTCCAAAATCAACTCCTGAAACATTCTCAACCAAGTTGTTTCAGCATTTCCGATCTCATCCTAGGTTGGGAAAGGAAAAGTTTTCACAAACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTCACGTATCATACAGATACCTTTTTAGACAAAAATCGTGATTATGTTGTAGTAGAACATTGCAATCTCTTATCTTCTTCAAAATGCCCTTTTGTTTCTGGTCTATTTCCTTTGCTACCTGAAGAATCTTCAAGATCATCATACAAGTTTTCTTCAGTAGCTGCCAGATTTAAGCAACAACTTCAAGCACTGATGGAGACCCTAAACTCAACAGAGCCTCACTACATACGATGTGTGAAACCAAATTCTTTGAATCGACCGCAAATATTTGAAAATGCAAGTGTCATACACCAGTTACGCTGTGGGGGTGTCCTTGAGGCTGTTCGGATAAGTCTGGCTGGTTATCCCACTCGAAGAACTTACTCAGAGTTTGTGGATCGTTTTGGGTTGATAGCCCCTGAATTTATGGATGGAAGTTATGATGATAAAGCTGCAACTGAGAAAATTTTGCAAAAGCTTAAGCTTGAGAATTTTCAGTTAGGTAGGACCAAAGTATTTCTCAGGGCTGGCCAAATTGGTATTTTGGACTCAAGACGTGCTGAAGTTTTAGACAATGCTGCAAAGTGTATTCAGCGCCGATTGAGGACATTTATTACACGTCAGTATTTCACAATTTTAAGATCTGCTGCGTTTTCTCTTCAGGCATGCTGCAGGGGTCACATTGCCCGGAAGATATATGCAGCTAAAAGGGAGACAGCAGCAGCTATCTCCATTCAGAAATATATTCGTATGTGGCTTACAAGGCATGCTCACTTAAAACTGAATTTTTCTGCTATTACCATACAATCTCATGTTCGTGGTTTTGTGACTCGCCAAAGATTCTTACATGTAAAAGAACATAGAGCTGCTACTTTTGTTCAGTTTGCAACTAAACTCCATACTGCCTTTTCTCTCAAACAACTTGGTCATCTTGATTACTTTCTTCGGCTTGACACCAAATATTTTACCTCACCTTTCTATTGTCATGACTCAAAACCGTACTCTATATCATTCAGTGGTAGGTGCTATACAGTACACCACTCTCACATGACCAGAAATCAACTTTGCTGCCGAAGATGTTGGTCAATTTATGGCAAAACCACCGAAATCTCATTGGATTATGTTAAACAAATCCCACAGTACCTTAAAGGTACTTTGATTCATGGACTACATCTTTAG 2406 0.3886 MFLLSLMHLTGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCSFERDAEKYKLGHPSHFHYLNQSKVYELDGVRNSEEYLKTRRAMDIVGISHADQESIFRVLAAILHVGNIEFSPGKEHDSSAVKNDKSRFHLQMAADLFMCDVDLLLATLCTRSIQTREGSIIKVLDCNAAVAGRDALAKTVYARLFDWLVDKINMSVGQDINSKIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYIEFVDNQDVLELIEKKPIGIIALLDEACMFPKSTPETFSTKLFQHFRSHPRLGKEKFSQTDFTVSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFVSGLFPLLPEESSRSSYKFSSVAARFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQIFENASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDKAATEKILQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLRTFITRQYFTILRSAAFSLQACCRGHIARKIYAAKRETAAAISIQKYIRMWLTRHAHLKLNFSAITIQSHVRGFVTRQRFLHVKEHRAATFVQFATKLHTAFSLKQLGHLDYFLRLDTKYFTSPFYCHDSKPYSISFSGRCYTVHHSHMTRNQLCCRRCWSIYGKTTEISLDYVKQIPQYLKGTLIHGLHL* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0388 801 Gene3D - 116 173 - -
Pvu1g0388 801 Gene3D - 649 700 - -
Pvu1g0388 801 Gene3D - 598 648 - -
Pvu1g0388 801 ProSiteProfiles IQ motif profile. 670 699 IPR000048 GO:0005515
Pvu1g0388 801 PRINTS Myosin heavy chain signature 13 38 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu1g0388 801 PRINTS Myosin heavy chain signature 60 87 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu1g0388 801 PRINTS Myosin heavy chain signature 292 320 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu1g0388 801 PRINTS Myosin heavy chain signature 345 373 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu1g0388 801 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 645 IPR027417 -
Pvu1g0388 801 SMART MYSc_2a 3 597 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu1g0388 801 PANTHER MYOSIN-15 12 710 - -
Pvu1g0388 801 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 646 695 IPR027417 -
Pvu1g0388 801 ProSiteProfiles IQ motif profile. 622 651 IPR000048 GO:0005515
Pvu1g0388 801 Gene3D Kinesin motor domain 7 526 IPR036961 -
Pvu1g0388 801 SMART iq_5 621 643 IPR000048 GO:0005515
Pvu1g0388 801 SMART iq_5 646 668 IPR000048 GO:0005515
Pvu1g0388 801 SMART iq_5 598 620 IPR000048 GO:0005515
Pvu1g0388 801 SMART iq_5 669 691 IPR000048 GO:0005515
Pvu1g0388 801 Gene3D Myosin VI head, motor domain, U50 subdomain 175 465 - -
Pvu1g0388 801 CDD MYSc_Myo11 11 584 IPR036018 -
Pvu1g0388 801 Gene3D - 531 597 - -
Pvu1g0388 801 ProSiteProfiles Myosin motor domain profile. 1 596 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu1g0388 801 PANTHER MYOSIN 12 710 - -
Pvu1g0388 801 Pfam IQ calmodulin-binding motif 623 642 IPR000048 GO:0005515
Pvu1g0388 801 Pfam IQ calmodulin-binding motif 673 690 IPR000048 GO:0005515
Pvu1g0388 801 Pfam IQ calmodulin-binding motif 601 619 IPR000048 GO:0005515
Pvu1g0388 801 Pfam IQ calmodulin-binding motif 648 666 IPR000048 GO:0005515
Pvu1g0388 801 Gene3D - 302 487 - -
Pvu1g0388 801 Pfam Myosin head (motor domain) 7 584 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0388 Pvu-Chr1 3781542 3801737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0388 11 716 Myosins gene family AT4G33200 76.869 0.0 1123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0388 K10357 - gmx:100790815 1298.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0388 1 3781542 3801737 Pvu1g0388 1 3781542 3801737 ECH
Pvu9g0848 9 13154344 13178649 Pvu1g0388 1 3781542 3801737 PCT