Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0364 ATGATTCTGTTTCAGGATCTCTTCTCCCTCCGCCGCCTCCACCACGTGTTCTCAGAATCGGTTTTGCAGTCTTTACGGGAGTCCTTTACGAGTTCGAGTTGCAAAAGCGCGGAGTTGGAGCAATGTCGCGACGACTCAACGGCGTTGGTTTTGAAATTCGTGGCGATGGCGTCGATTTTGGTGGCCGGATTTGGGGGGATCGCGATTCCGCTGGCGGGGAAGTCGAGGTGGTTGCTGCGGCCGGACGGGGACGCGTTCACGGCGGCGAAGGCGTTCGCGGCGGGGGTGATTCTAGCCACGGGGTTTGTGCACATGTTGAGGGATTCCTGGGAGGCGCTTGGGCACCCGTGTCTGAGAACGCGCTGGGGCGCGTGGGCGAAGTTTCCTTTCACCGGTTTCTTCGCCATGGTCTCCGCGCTCTGCACTCTCCTCGTTGACTTTATGGCAACTGCGTACTACGAGCGGAAGGAGGGGCTTGGGCGCGTGGAGCGTGCGAACATTGTTGAATGTAGGAGTGACGAGGAGGCGTTGTTGGAAACGGGAATAGTGGAGGTTAAGGATGTTGGGGGAGAGGGAAGCCATGCGGTGCACCGTACACACTCCCACTCGCACCACCGTGATGATGTGGAAAGTACCGTTCGGCACGTCGTCGTTTCACAAGTATTGGAACTTGGGATTGTATCTCATTCGATGATAATTGGGTTATCTCTAGGAGTTTCCCAAAGCCCTTGTACCATGAGACCCCTAATTGTGGCATTATCGTTTCATCAGTTCTTCGAAGGATTTGCACTTGGTGGATGTATCTCTCAAGCCCAATTCAAGACCTTATCAGCAACAATAATGTCGTGTTTTTTTGCACTAACAACGCCCTTAGGTGTTGCGACTGGGGCTGGTATTGCTTCAGTTTTTAACCCTCACAGTCCAGGAGCACTCATCACTGAAGGCATCTTGGACTCTTTGTCAGCTGGGATTTTAGTGTACATGGCTTTAGTGGACTTAATAGCTGCAGATTTTCTTAGCAAGAAAATGCATTGCAACTTTAGGCTGCAGATTACAAGTTACTGCTTGCTCTTCCTTGGAGCTGGATTGATGTCTTCACTCGCAATTTGGGCATGA 1116 0.5224 MILFQDLFSLRRLHHVFSESVLQSLRESFTSSSCKSAELEQCRDDSTALVLKFVAMASILVAGFGGIAIPLAGKSRWLLRPDGDAFTAAKAFAAGVILATGFVHMLRDSWEALGHPCLRTRWGAWAKFPFTGFFAMVSALCTLLVDFMATAYYERKEGLGRVERANIVECRSDEEALLETGIVEVKDVGGEGSHAVHRTHSHSHHRDDVESTVRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMRPLIVALSFHQFFEGFALGGCISQAQFKTLSATIMSCFFALTTPLGVATGAGIASVFNPHSPGALITEGILDSLSAGILVYMALVDLIAADFLSKKMHCNFRLQITSYCLLFLGAGLMSSLAIWA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0364 371 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 208 371 - -
Pvu1g0364 371 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 30 207 - -
Pvu1g0364 371 Pfam ZIP Zinc transporter 51 368 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pvu1g0364 371 TIGRFAM zip: ZIP zinc/iron transport family 34 371 IPR004698 GO:0005385|GO:0016021|GO:0071577
Pvu1g0364 371 PANTHER ZINC/IRON TRANSPORTER 30 207 - -
Pvu1g0364 371 PANTHER ZINC/IRON TRANSPORTER 208 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0364 Pvu-Chr1 3438923 3443211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0364 25 371 Inorganic Solute Cotransporters AT1G10970 60.847 1.30e-148 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0364 K14709 - gmx:100809426 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0364 1 3438923 3443211 Pvu9g0798 9 12668956 12670950 PCT