Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0357 ATGCCAAAGATGAAGCACCTGCTCAGAAAGCTTCACATCGGTGGTGGCGCTGCCACCATCAATCACAATCACAATCACAATCACAACGCATTGTCCTCGCACGCGCATCACGCTCCCTCCACTCCCGCGCTCTCTTCGCCCACCGTCGTTTCGGATCCGACGCCGGCTCCGAGCCCCGTCGTGGAGGCGCAGAACGACGTCGCCGAATTCAACTTGTTGCAGGAGGAGGAGTTTCAGATGCAACTAGCGCTCGCAATCAGCGCCTCCGATTCCGATCGCCGCGACACCGCGGAATCGGCGCAGATCGACGCCGCAAAACAGATCAGCCTTGGTTACTCTGCTTCGTTCACTGACACTCAAGCCCTAGTTCAGTTCCAATCGCTTCGTTATTGGAACTACAATGTGATTGGTTATGATGAAAAAGTGATGGATGGGTTTTATGATGTATTTGGGGTTACCTCAAATTTGGTTGATCGAGGGAAGATGCCATTGTTGGTGGATCTGCAGACGGCTCCTGTCTCGAGAGATGTTGATTGTGAGGTGATTTTGGTGAACCATGTGGTAGATCTTGAGCTCAATCAGCTTGAGAGGAAGGCGTGTAGTTTGGTTGAGGAGTGTTGTGTTTCTGAACTGGGACTGATTTTGAGTGGCTTGCTTCAGAAGCTCGCGGATGTTGTTGTTAATAGAATGGGTGGACCTGTTCTTAATGCTGAGAAACTTACTAAGAGGTGGGCTATGAGGAGTTGTGAGTTGCGGGATTCTATGCTGACCATTGTTCTTCCCCTTGGTTGTCTAGATGTTGGACTTTCACGTCACCGAGCCCTGCTTTTTAAGGTACTTGCTGATAGGATTAACATTCCCTGCATGCTGGTTAAAGGGAGCTATTATACAGGAACTGATGATGGGGCTGTGAATTTGATTAAAGCTGACGATGGAAGTGAATACATAATTGATATGATGGGTGCCCCTGGAACTCTTATTCCTGCCGAGGTACCCAGCAGCCAGCTCGAAAGCAACAGTTTTGCTGTTAGGGGTTGTGCAGAGCTTGTTGGACAACCAGACAAGACAAGTTCAATGGTAGATGATAGAACTGGTGTGCAAGGAGTCCTTTCTGATTGTGGTAGAGTTTCAACAGTGGGGAGGGTCCAGACAGAAGAATTATTAGTCATGGGCAGTCAAACAAATCCCGATGAAATTAATCATGTTAAAGTTAATGAGTCAAGGAGATTTGAACATACAGAAGCATATGAATGCTCTTCACATACGAAACCATCACCTGCTGAGAATATGCATGTAAAAAATGTCTCTAAGTATGTTCTCAGTGCAGCAAAGGACCCAGAATTTGCCCAAAAACTACATAATGTTCTACTAGAGAGTGGTGCCTTACCTCCTCCTGATCTTTTTTCAGATATAAATCCCCAAGATAGGGGTGTAGATAAAGTAAATGAAAAAAATGTTGATTCTGTTCAAGCTGACACAAATAGGTTATTATTATTAAGGTATGAAAAGTCTCTCATACCCTCACATGGGTTGGGCTCTGCCAGTGATACTAGGTTATGTCAATCAGCTGACTGGTTATCTGAGCAACAAAAGGAATTGCAAACAGATGTTGAATTTTACAATTCATCACAGAGTGATAATACAAGGAATGGGTTTTTAAATGTTTCTGATAGAGATATTGACGTAGAGAAATCTAACGCAATGAATGTTGTTTTGGCTTCTATTCACTCACATAATAAGATAGTTAAAGAAAAGTGTAGTGGATCTTCCGTGCCCAAGGCAACTCTTTCCTGTAAAATGCATAATGGGATTGGGTGTTTCTGTGAAGATGATGAAAATGGTTATAGAAAGAATGTTGGAGCTTCTTTTAATAACAGCGGGTTGGGCAAAGATTCAGCTGTTCAAAGAAATGAGATGGAGGTTAATGGAGACTGTTATGATGGTAGAAACAAGGAAGTTGACCCAGTGCTTGGTGAAGGCACAGAATGGGAAATTCAATGGGAGGATCTTGATATTGGTGAGCGTATTGGTATTGGTTCGTATGGCGAAGTTTATCGTGCCGATTGCAATGGCACTGAAGTTGCTGTAAAGAAGTTTCTGGACCAAGATTTCTCTGGTGATGCACTAGCTCAGTTCAAATCTGAAGTTGAGATCATGCTAAGGCTGCGACATCCAAATGTTGTGCTCTTCATGGGAGCAATTACTCGGCCCCCGCAATTCTCTATCTTGACAGAATTTCTTCCAAGAGGCAGTTTGTATAGGCTATTGCATCGTCCCAATCTTCGGCTTGATGAGAAGAAACGGTTGCGCATGGCTCTAGACGTGGCTAAGGGAATGAATTACTTGCACACGAGCCATCCTCCCATTGTACACCGAGATTTGAAATCTCCAAATCTTCTTGTTGACAGGCATTGGATTGTTAAGGTTTGTGATTTTGGTCTGTCAAGAATGAAGCACCATACATTTTTGTCATCAAAGTCTTGTGCTGGAACGCCTGAGTGGATGGCACCAGAAGTCTTGAGAAATGAGCCAGCCAATGAGAAGTGTGATGTGTATAGTTTTGGTGTGATCTTGTGGGAGTTGATCACTGCAAGAATTCCCTGGAAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAACAAACGGCTTGAAATTCCAGAAGATGTCAATCCAGCAGTAGCACAGATTATACGTGATTGCTGGCAAACGGAGCCACACTTGCGGCCATCTTTCTCGCAGCTGATGTCTCGTCTTTACCGTCTTCAACATATGGTTGTCCCACAAACGAGTTCAACACATTAA 2814 0.4435 MPKMKHLLRKLHIGGGAATINHNHNHNHNALSSHAHHAPSTPALSSPTVVSDPTPAPSPVVEAQNDVAEFNLLQEEEFQMQLALAISASDSDRRDTAESAQIDAAKQISLGYSASFTDTQALVQFQSLRYWNYNVIGYDEKVMDGFYDVFGVTSNLVDRGKMPLLVDLQTAPVSRDVDCEVILVNHVVDLELNQLERKACSLVEECCVSELGLILSGLLQKLADVVVNRMGGPVLNAEKLTKRWAMRSCELRDSMLTIVLPLGCLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGTLIPAEVPSSQLESNSFAVRGCAELVGQPDKTSSMVDDRTGVQGVLSDCGRVSTVGRVQTEELLVMGSQTNPDEINHVKVNESRRFEHTEAYECSSHTKPSPAENMHVKNVSKYVLSAAKDPEFAQKLHNVLLESGALPPPDLFSDINPQDRGVDKVNEKNVDSVQADTNRLLLLRYEKSLIPSHGLGSASDTRLCQSADWLSEQQKELQTDVEFYNSSQSDNTRNGFLNVSDRDIDVEKSNAMNVVLASIHSHNKIVKEKCSGSSVPKATLSCKMHNGIGCFCEDDENGYRKNVGASFNNSGLGKDSAVQRNEMEVNGDCYDGRNKEVDPVLGEGTEWEIQWEDLDIGERIGIGSYGEVYRADCNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRPPQFSILTEFLPRGSLYRLLHRPNLRLDEKKRLRMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDRHWIVKVCDFGLSRMKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELITARIPWKGLNPMQVVGAVGFQNKRLEIPEDVNPAVAQIIRDCWQTEPHLRPSFSQLMSRLYRLQHMVVPQTSSTH* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0357 937 MobiDBLite consensus disorder prediction 20 51 - -
Pvu1g0357 937 MobiDBLite consensus disorder prediction 17 58 - -
Pvu1g0357 937 ProSiteProfiles Protein kinase domain profile. 670 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0357 937 Pfam Ethylene-responsive protein kinase Le-CTR1 124 327 - -
Pvu1g0357 937 PANTHER SERINE-THREONINE PROTEIN KINASE 63 934 - -
Pvu1g0357 937 Gene3D Transferase(Phosphotransferase) domain 1 749 934 - -
Pvu1g0357 937 PRINTS Tyrosine kinase catalytic domain signature 744 757 IPR001245 GO:0004672|GO:0006468
Pvu1g0357 937 PRINTS Tyrosine kinase catalytic domain signature 783 801 IPR001245 GO:0004672|GO:0006468
Pvu1g0357 937 PRINTS Tyrosine kinase catalytic domain signature 830 840 IPR001245 GO:0004672|GO:0006468
Pvu1g0357 937 PRINTS Tyrosine kinase catalytic domain signature 849 871 IPR001245 GO:0004672|GO:0006468
Pvu1g0357 937 PRINTS Tyrosine kinase catalytic domain signature 893 915 IPR001245 GO:0004672|GO:0006468
Pvu1g0357 937 Pfam Protein tyrosine and serine/threonine kinase 671 922 IPR001245 GO:0004672|GO:0006468
Pvu1g0357 937 ProSitePatterns Protein kinases ATP-binding region signature. 676 698 IPR017441 GO:0005524
Pvu1g0357 937 SMART serkin_6 670 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0357 937 Gene3D Phosphorylase Kinase; domain 1 663 747 - -
Pvu1g0357 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Pvu1g0357 937 SUPERFAMILY Protein kinase-like (PK-like) 661 931 IPR011009 -
Pvu1g0357 937 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 63 934 - -
Pvu1g0357 937 CDD STKc_MAP3K-like 676 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0357 Pvu-Chr1 3383162 3394247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0357 647 936 MAP Kinase Kinase Kinase AT5G11850 81.724 2.91e-174 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pvu1g0357 PK_Tyr_Ser-Thr 2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0357 K04424 - gmx:100779137 1592.4