Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0344 ATGGGTATCTGCATATCAGTTTCAGAAAAAGATGATGATGATGATGAGAATGTGACAATATTTGAAGAAAGGAAGAAGGTCCCAAATGGGAGTCAGAGACTTTTCTCTGTTTACTCCAAACAGGGTACCAAAGGACTCAACCAAGATGCTGCCTCCATTCACCAGGATTATGGAATGGAAGATGGAACATATTGTGGTGTTTATGATGGTCATGGAGGGAATGGACACAGAGTGAGCAAAATGGTAAGCAGTCGATTATCTTCCCTCATACTGGACCAAAAGAATGTTCTTGAAAAGATTGATGCTATAGAAAATGGTTATTACAACACCACCTCAAAAAACCATGTTGGCACAATGAAAAAGGACTCAGCTGCAAACAACTTTCAGAAATGGAAAGAAGCAATTGTTAGTGCTTTCAAGGTGATGGAAAAAGAGGTCAAGCTTCAACATAATCTAGATTGCTCTTGCAGTGGAACCACTGCTGTAGTTATCATAAAACAGGGTGAAGGTCTTGTCATAGCAAATCTGGGTGACTCAAGAGCAGTGATGGGAACAATATGTGATGAAAAACTCATTGCCACTCAGTTAACCACAGATTTGAAGCCTGAATTACCTCGAGAAGCAGAAAGAATAAGAAGGTGCAATGGTTGTGTGTGTGCATCGAAGGAAGAACCAGAAATCCAGAGAGTGTGGATTCCAAACAATGATAACTCCCCTGGCCTAGCCATGTCTCGATCTTTTGGAGATTTCTTGCTCAAGAATCATGGTGTTATTGCTGTTCCAGATATTTCTTATCACTCTCTAACATCAAGTGACCAATTTATTGTTCTTGCTAGTGATGGGGTGTGGGATGTACTTAACAACAATGAGGTTGCATCAATTGTGTGGAGTGCAGAGAGTGAAGAGGTTGCAGCAAGAGCAGTGGTGGAAGCAGCCACTACTGCATGGAAAGACAAGTTTCCTTCCTATATGGCAGATGACTGCACGGTGGCTTGTCTCTTCCTGCACCAGAAACCACAACTTCAGCCTTTTCAAAACTAA 1041 0.4159 MGICISVSEKDDDDDENVTIFEERKKVPNGSQRLFSVYSKQGTKGLNQDAASIHQDYGMEDGTYCGVYDGHGGNGHRVSKMVSSRLSSLILDQKNVLEKIDAIENGYYNTTSKNHVGTMKKDSAANNFQKWKEAIVSAFKVMEKEVKLQHNLDCSCSGTTAVVIIKQGEGLVIANLGDSRAVMGTICDEKLIATQLTTDLKPELPREAERIRRCNGCVCASKEEPEIQRVWIPNNDNSPGLAMSRSFGDFLLKNHGVIAVPDISYHSLTSSDQFIVLASDGVWDVLNNNEVASIVWSAESEEVAARAVVEAATTAWKDKFPSYMADDCTVACLFLHQKPQLQPFQN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0344 346 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 340 - -
Pvu1g0344 346 SUPERFAMILY PP2C-like 30 337 IPR036457 -
Pvu1g0344 346 CDD PP2Cc 33 297 IPR001932 -
Pvu1g0344 346 Pfam Protein phosphatase 2C 64 312 IPR001932 -
Pvu1g0344 346 ProSiteProfiles PPM-type phosphatase domain profile. 34 335 IPR001932 -
Pvu1g0344 346 PANTHER ALPHABET, ISOFORM E-RELATED 1 340 - -
Pvu1g0344 346 Gene3D - 16 338 IPR036457 -
Pvu1g0344 346 SMART PP2C_4 24 333 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0344 Pvu-Chr1 3258622 3261838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0344 1 335 PP2C-type Phosphatase Gene Family AT1G03590 45.930 1.16e-96 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0344 - - gmx:100815312 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0344 1 3258622 3261838 Pvu1g0344 1 3258622 3261838 ECH
Pvu1g0344 1 3258622 3261838 Pvu9g0784 9 12546295 12548144 PCT