Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0262 ATGGCGTCTTCCTCAGAGAACAGAAGCAACACGACGCGTCCCCAGCGCGAGGCGAAGAAGAGAGCCGCAGCTGCCATATGCGAACAGCTCGGAAATGCGAAGAAGAAGCGCGTCGTTTTGGGAGACCTCACGAATGTTCCAAACGCCGTTTCCGTTTCGGATATTCCGAAACGGAAAAGAGGTAAACTGAAGAATATCGATGAAAGAAGCGACTCTCAACTCTGTGGGCCATACGGTTCTGATATATACGAGTACCTTTGCGGATTGGAGGTTGTTCCTAATTTGAGACCGATGCCGGATTATGTTCAGAAGGTTCAGAATGACGTGGATGATAACATGCGCGGTCTTCTGGTGGATTGGTTGGTTGAGGTTGCAGAAGAGTATGAACTGGTTTCAGATACGTTGTACTTTTGTGTGGCTTATATAGATAGGTTTTTATCGTTGAATGTATTGTCCAGAGAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTCATTGCTTCGAAATATGAAGAGGTTAAGCCACCCGAGGTGGAGGACTTTTGTTACATTACGGATAATACATACTCCAAGGAAGAGGTTGTGAATATGGAAGCCGATGTATTGATGGCTTTGAAGTTTGAATTGGGTGCTCCTACAGTGAGGACGTTCTTGAGGAGATTCTGTGGAGTTGGTCAAGTGGGTGTTGATACTTCTGATCTCCAGTTTGAGTTCCTTAGCTGCTACCTTGCAGAGCTCAGTTTGTTGGATTATTACTGTGTAAAGTTCTTACCATCTTTGGTGGCAGCATCTGTTGTGTTCTTAGCAAGATTTATGTTAAGCACAAGGACACATCCTTGGAATTCGGCCCTCCACCAACTCACTAAATATAAACCCGCTGACTTGAAGGAATGTATTCTAAACATACATGACTTGTACCTCAGAAGGAGGGGGCCTTCTTTGGAAGCTGTGAGAGAGAAGTACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCATCTCCTCCGGAGATACCCCTTTCTTTTTTTGAATTTTCAAGGGTATCTTAG 1050 0.4486 MASSSENRSNTTRPQREAKKRAAAAICEQLGNAKKKRVVLGDLTNVPNAVSVSDIPKRKRGKLKNIDERSDSQLCGPYGSDIYEYLCGLEVVPNLRPMPDYVQKVQNDVDDNMRGLLVDWLVEVAEEYELVSDTLYFCVAYIDRFLSLNVLSRERLQLLGVAAMLIASKYEEVKPPEVEDFCYITDNTYSKEEVVNMEADVLMALKFELGAPTVRTFLRRFCGVGQVGVDTSDLQFEFLSCYLAELSLLDYYCVKFLPSLVAASVVFLARFMLSTRTHPWNSALHQLTKYKPADLKECILNIHDLYLRRRGPSLEAVREKYKQHKFKCVATTPSPPEIPLSFFEFSRVS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0262 349 SMART cyclin_7 119 203 IPR013763 -
Pvu1g0262 349 SMART cyclin_7 216 304 IPR013763 -
Pvu1g0262 349 ProSitePatterns Cyclins signature. 114 145 IPR006671 -
Pvu1g0262 349 Pfam Cyclin, C-terminal domain 212 334 IPR004367 -
Pvu1g0262 349 SMART Cyclin_C_2 212 335 IPR004367 -
Pvu1g0262 349 SUPERFAMILY Cyclin-like 71 209 IPR036915 -
Pvu1g0262 349 SUPERFAMILY Cyclin-like 212 337 IPR036915 -
Pvu1g0262 349 CDD CYCLIN 113 202 IPR013763 -
Pvu1g0262 349 PIRSF Cyclin_A_B_D_E 1 340 IPR039361 -
Pvu1g0262 349 Pfam Cyclin, N-terminal domain 81 209 IPR006671 -
Pvu1g0262 349 CDD CYCLIN 212 303 IPR013763 -
Pvu1g0262 349 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 24 346 - -
Pvu1g0262 349 MobiDBLite consensus disorder prediction 1 21 - -
Pvu1g0262 349 Gene3D - 97 210 - -
Pvu1g0262 349 Gene3D - 81 331 - -
Pvu1g0262 349 PANTHER CYCLINS 24 346 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0262 Pvu-Chr1 2349235 2353179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0262 5 344 Core Cell Cycle Gene Families AT1G47230 56.164 3.66e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0262 K06627 - gmx:100801988 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0262 1 2349235 2353179 Pvu9g0711 9 11706505 11709065 PCT