Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0185 ATGCAGGTAAGGGTAAAGATTAAGGTGGTGACGGGTACTCCCAGTGGTGCTGTGGCGGCTGAAGCTAGATGGAGCGGTTCCCATTGGGTCATATTGGACAAGAAGTTAAAGCAAGAGGTAAATCATTGCATGGATGAACTCAACTGTAGCATTGTGGTGATGAATGGGTCACAGGCAAAAATCCTCAGACTTAACTTAGGGTGTTCCGATGAACTCCAAACTCCTTTTTTCTCGGCTAGTTCTTCACCAGGCATAGAAATTGCAAAGCTAAAAGGTAGAAGATTGAAGCATTCTACACCAGTGGGTAGCCCTGAAGAAGCAGGTACTTCCGTTATAAGAAATATAGGAGTAAATTCAGGGTCAAGTTCTGACTCCACGACTTCTCCTTTCCTTGTCTTTGAACAAAACCCTCTCTACGAGGGTCAAGGCCCTGGAAAAAACATACACAAAGCAATCAACAAACCAATAGATTTCAATGTCCAGCCATCATTATACTTTGATATTGAAAGAGATCGCCCTCCCCCGCCATGGTCGCGTCCAACACCATCTATGGCTAGTGAAAACAATACTGTATTTTGGATTCCTCAAAACCACATTGTAGACGACAAGTTTCGGAAAAATAAAAACAACAGTATTATCCAAAGAACTAAATCTTCATCTTCGAAAACTTTACTCGAGAATTTTATACGTTGTGATCAAGAGATGAGAAGAAAAGAATATGGGTTTGACCAAGCTCAAAGTAGAAGTTACGTCCCCGACCCAAGCAACAGAGATAATTGCATACCTTTGGGAAGAACTACCTCAATACCTCCTCCCTTATGCTCACGGTGTCATAATAAAGCACCAGTATTTGGAAAGCCTCCAAAACGGTTTTCTTACAAAGAAATAGAGGAAGCTACTGATATGTTCTCAGATGTGAACTTTTTGGCTGAAGGTGGATTTGGTGTGGTCCACAAGGGAATACTCAAAGATGGCCAGGTTGTTGCGGTGAAACAATTAAAGTTTGGGGGTTCTCAAGCAGATATTGATTTCTGCAGGGAAGTTCGGGTTTTGAGTTGTGCACAACACAGAAATGTTGTGCCGTTGATAGGATTTTGTACAGAGAGCAATTTGAGGATATTAGTTTATGAGTACATATGCAACGGATCCTTAGACCTCTACTTATATGGAGATGAGATTATGCCTTTCGATTGGAACTCACGGTTAAAGATAGCAATTGGAACTGCACGAGGCTTGCGCTATCTTCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGACCTTCGACCCAAAAATATACTTTTAACCCATGACTTTGAACCTTTGGTGGCGGATTTTGGGCTTGCTAGATGGCACTCAGAATGCAATATAAATACAGAAGATCGGGTTATAGGAACTTCAGGGTATCTTGCACCGGAGTATCTTGAGACTGGAAACCTTACATATAAAGTAGATGTATATGCATTTGGAATTGTATTATTAGAGTTAATAACAGGTAGAAGAATTGGCGAGTTGGAACAGTTCAATGGACTCTCGTATCTTTCTGAATGGTTTCACCCTCTACGCATGTCAGAGACCAGTCATATATTACAAAACGTTCGATCTCTCAAACCATGCTTCAACTCTGAGGAGTTATTGGCATTTAATCTTCAATTTCAAGCCATGGCACGAGCTGCTTCGTTGTGTCTCCGTGTGGATCCTAATGCCAGACCCCCAATGTCAAAGATCCTGAGAGTGCTGGAAGGGGCTGATCCAGTTCGTCCTGTGGGTTTAGACATGAATTCAGTTGGTAACACAAGTGGGCATTTAAGCGGTTTGAAGTCGCTCACTCCACCAGAAGGTACAATAAGTCATTCTCGTAGACTATCACATTGA 1878 0.4191 MQVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEVNHCMDELNCSIVVMNGSQAKILRLNLGCSDELQTPFFSASSSPGIEIAKLKGRRLKHSTPVGSPEEAGTSVIRNIGVNSGSSSDSTTSPFLVFEQNPLYEGQGPGKNIHKAINKPIDFNVQPSLYFDIERDRPPPPWSRPTPSMASENNTVFWIPQNHIVDDKFRKNKNNSIIQRTKSSSSKTLLENFIRCDQEMRRKEYGFDQAQSRSYVPDPSNRDNCIPLGRTTSIPPPLCSRCHNKAPVFGKPPKRFSYKEIEEATDMFSDVNFLAEGGFGVVHKGILKDGQVVAVKQLKFGGSQADIDFCREVRVLSCAQHRNVVPLIGFCTESNLRILVYEYICNGSLDLYLYGDEIMPFDWNSRLKIAIGTARGLRYLHEDCRVGCIVHRDLRPKNILLTHDFEPLVADFGLARWHSECNINTEDRVIGTSGYLAPEYLETGNLTYKVDVYAFGIVLLELITGRRIGELEQFNGLSYLSEWFHPLRMSETSHILQNVRSLKPCFNSEELLAFNLQFQAMARAASLCLRVDPNARPPMSKILRVLEGADPVRPVGLDMNSVGNTSGHLSGLKSLTPPEGTISHSRRLSH* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0185 625 Gene3D Transferase(Phosphotransferase) domain 1 379 588 - -
Pvu1g0185 625 SMART tyrkin_6 303 581 IPR020635 GO:0004713|GO:0006468
Pvu1g0185 625 ProSitePatterns Tyrosine protein kinases specific active-site signature. 424 436 IPR008266 GO:0004672|GO:0006468
Pvu1g0185 625 ProSiteProfiles Protein kinase domain profile. 303 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0185 625 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 2 613 - -
Pvu1g0185 625 MobiDBLite consensus disorder prediction 601 625 - -
Pvu1g0185 625 Gene3D Phosphorylase Kinase; domain 1 273 378 - -
Pvu1g0185 625 PANTHER OS01G0253100 PROTEIN 2 613 IPR045271 GO:0004714|GO:0006468
Pvu1g0185 625 SUPERFAMILY Protein kinase-like (PK-like) 283 582 IPR011009 -
Pvu1g0185 625 CDD STKc_IRAK 309 583 - -
Pvu1g0185 625 Pfam Protein tyrosine and serine/threonine kinase 309 580 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0185 Pvu-Chr1 1537145 1540529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0185 223 577 Trihelix Transcription Factor Family AT1G68690 40.984 3.78e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pvu1g0185 PK_Tyr_Ser-Thr 5.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0185 - - pvu:PHAVU_001G018000g 1245.34