Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0161 ATGGAGTCCGAACTCCAAGGCCTCAATCCCAAACCGCCCAAACAACCCGACCCGAACAAGGACGAGCGTCCTCTGCTCAAGCCCCCCGACGCCGCCGCCTCCTCCGGCGAACTCGACAAGAAATACGCTGCGTTCGTTCGGAGCGATGTGTACGGTTCCATGGGACGCGGTGAGTTACCGACGCGGGAGAAGGTGCTACTCGGCTTGGCGCTTGTGACGCTGGTTCCGGTCAGGGTGGTGGCGGTAACCACCATCCTGTTGCTCTATTACTTGATTTGTAGGGTTTGCACGATGTGCTCTGTCCCGAATCGCGAGGAGGAGCACCAGGAGGATTACGCGCACATTGTAGGGTGGAGGAGGATCGTCATTGTGCAGTGTGGAAGAGCCCTCTCCAGGCTCATGCTCTTCGTGTTAGGGTTTTATTGGATAACACAAACGTATCGGATTCCACAGACTTACGTTGAAAACCCTGCCACCCCCAGCGAGCAGGAGAACGATGCTCAGTCTGAAGACACTCAGTCTGAAGACTCAAGACCCGGTGTTATAATATCTAATCATGTGTCATATTTGGATATTTTGTATCACATGTCTGCCTCGTTCCCGAGTTTTGTTGCTAAGAGATCAGTGGCTAAACTTCCTCTTATTGGTCTCCTCAGTAAGTGCCTTGGTTGCGTCCTGGTTCAACGGGAATCAAAGTCACCAGACTTTAAGGGTGTTTCAGCTGTTGTCACTGAGAGAATTCGGGAAGCTCACCAAAATGCATCTGCTCCAACAATGATGTTATTTCCAGAAGGTACAACCACCAATGGGGACTTTCTCCTTCCGTTCAAGACTGGCGGTTTTTTAGCTAAAGCACCAGTACTTCCTGTAATTTTAAGCTATCATTACCAGAGACTTAGCCCTGCCTGGGAATCCATATCTGGCGTACGTCATGTGATTTTAATTCTCTGTCAGTTTGTAAATTATATGGAGGTGACACAGTTACCTACTTACTATCCCTCGCAGCAGGAGCAGGATGATCCAAAACTATATGCTAATAATGTTAGAAGGTTGATGGCAAGCGAGGGAAATTTGATACTTTCAGATATTGGGCTAGCTGAAAAACGAATATATCATGCAGCCCTCAACGGTTTGTTTTCCCAATGCTAA 1149 0.4874 MESELQGLNPKPPKQPDPNKDERPLLKPPDAAASSGELDKKYAAFVRSDVYGSMGRGELPTREKVLLGLALVTLVPVRVVAVTTILLLYYLICRVCTMCSVPNREEEHQEDYAHIVGWRRIVIVQCGRALSRLMLFVLGFYWITQTYRIPQTYVENPATPSEQENDAQSEDTQSEDSRPGVIISNHVSYLDILYHMSASFPSFVAKRSVAKLPLIGLLSKCLGCVLVQRESKSPDFKGVSAVVTERIREAHQNASAPTMMLFPEGTTTNGDFLLPFKTGGFLAKAPVLPVILSYHYQRLSPAWESISGVRHVILILCQFVNYMEVTQLPTYYPSQQEQDDPKLYANNVRRLMASEGNLILSDIGLAEKRIYHAALNGLFSQC* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0161 382 MobiDBLite consensus disorder prediction 1 35 - -
Pvu1g0161 382 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 11 378 - -
Pvu1g0161 382 MobiDBLite consensus disorder prediction 156 178 - -
Pvu1g0161 382 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 151 362 - -
Pvu1g0161 382 SMART plsc_2 180 295 IPR002123 GO:0016746
Pvu1g0161 382 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 11 378 - -
Pvu1g0161 382 CDD LPLAT_LPCAT1-like 132 369 IPR045252 GO:0008374
Pvu1g0161 382 Pfam Acyltransferase 173 291 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0161 Pvu-Chr1 1311150 1318682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0161 1 381 Acyl Lipid Metabolism Gene Families AT1G80950 62.245 2.40e-175 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0161 K13510 - gmx:100820536 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0161 1 1311150 1318682 Pvu9g0584 9 10396619 10402265 PCT