Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0142 ATGGCATATACTGTTTCTGAGCTTAACTCTTCAACCTTTATGATGTCAAGTAAATGTGCAGCAGTTTTTGAGATTCCAATTACAAGCAATGGCAGAGATAAGGTACACCATTCTGTGTGCTTAGAGCTTCATAGACTCATCGATAGAATTTCACATGTAACTTTAGATATTGAATCTGCCAGACCAAATTGCAAGTTAGCTATGGAGGCATTGTGCTCACTACACTTCACTTTGGCTAAAGCCAAGTCAGTTATCAAAGATTGTTCAAAATGCAGTAAACTCTTCCTGGCAATCACATCCCCCAAGATACTCTCAAGATGTCAAAAACTAAGAAACGCTTTTGAGTTGTATTTGTCAGAGATTCAAGATGCAGTTCCAATACCATTGGCTGATAAGATATCTGCAATACTACATGACCTTAGGGGTGCAAAATTCTCCCTGGAATTTGCAGAAGAGGAGGCTAGGAAGGTACTACTTTCACTGTTTGAGAAGAATTTTCCAGATAAAGCTTCTATGGAAAAGGAAGAACTGGAAGCTATACAAATTGCAACTTGTAGATTGGAGATCAAATCTGCATTCTCTCTCTTAGTAGAGAAAGCAAGTATCAAGAATCAACTTGATGAAGTGAATGGAAGAAACCAAAAGGAGAAGGAGCTTCTAGAATACCTGAAGTATCTCTTGATCAAATATAGGAAATCCATTTGTGTGTTTCAAGATGGAGACCTCTCACTGACATCATGA 741 0.3806 MAYTVSELNSSTFMMSSKCAAVFEIPITSNGRDKVHHSVCLELHRLIDRISHVTLDIESARPNCKLAMEALCSLHFTLAKAKSVIKDCSKCSKLFLAITSPKILSRCQKLRNAFELYLSEIQDAVPIPLADKISAILHDLRGAKFSLEFAEEEARKVLLSLFEKNFPDKASMEKEELEAIQIATCRLEIKSAFSLLVEKASIKNQLDEVNGRNQKEKELLEYLKYLLIKYRKSICVFQDGDLSLTS* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0142 246 PANTHER U BOX DOMAIN-CONTAINING 39 235 - -
Pvu1g0142 246 Coils Coil 199 219 - -
Pvu1g0142 246 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 5 39 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0142 Pvu-Chr1 1160417 1162712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0142 34 203 U-box Gene Family AT4G36550 39.412 1.31e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0142 - - pvu:PHAVU_001G013800g 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0142 1 1160417 1162712 Pvu1g0142 1 1160417 1162712 ECH