Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0107 ATGGTGGGATTCAGAAACAGATACATGGTGATGGAGGTTTTTGTCAACCCTAATAGAGACAAAGTGGGCAATGATTCTATTATAATTACACAGTTTAATGTCTCCAAAGCTGTGAAAGACAGCCTTTTGGAGAATTTTGGGGAGTGTGGTTTGGCTTCATCGTTGGGATCATTCCAAGTTAAGTATGTGAATTCAATTACCAATGTGTGTATAATTCGGGTATCAAGAGAGGACTATCAGAAAGTATGGTCTGCCATTACAATGGTCACAAACATTGCAAACTGCCCCGTCATGTTTAATTTGCTGGATTTGTCTGGAAGTATAAGGGCTTGTAAAAATGCTGCCTTGAAGTGTGAGGAATCAAAGTTTGAACAGTACAAACTCATGGTTGGTGATCGATTCTCTACTGCCGATTCTGATGGCATGAATTCTTGTCTCAACAAGATCAAAGTTTTGGAACACTGA 465 0.3935 MVGFRNRYMVMEVFVNPNRDKVGNDSIIITQFNVSKAVKDSLLENFGECGLASSLGSFQVKYVNSITNVCIIRVSREDYQKVWSAITMVTNIANCPVMFNLLDLSGSIRACKNAALKCEESKFEQYKLMVGDRFSTADSDGMNSCLNKIKVLEH* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0107 154 PANTHER RIBONUCLEASE P/MRP PROTEIN SUBUNIT POP5 1 140 - -
Pvu1g0107 154 SUPERFAMILY Rnp2-like 1 119 IPR038085 -
Pvu1g0107 154 Pfam Rpp14/Pop5 family 7 115 IPR002759 GO:0001682|GO:0030677
Pvu1g0107 154 PANTHER OCTANOYLTRANSFERASE 1 140 - -
Pvu1g0107 154 Gene3D Ribonuclease P, Pop5 subunit 1 120 IPR038085 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0107 Pvu-Chr1 922246 924421 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0107 K03537 - gmx:100779855 268.47