Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0103 ATGCGAGTCTTCGCTTCTCGAACCTCCAACTTCTTCAAGCGCAATCTCGAGAATTTCCCATACAATTTCAACTTCTTCAGAGAATTCGCGCAATCCACTGCAATCCCCAAAAAGCAACTTAGGGTTCGCGACCACGGCTACGACAACTACATGGAAGTGGAGAAGAAAACGCGCAAGGTCCTCAAATTTCAGAGCATCATCCTCTCCGAGCCCAGCCAATCGCTCCCAATCTCGCGCCTCGAAACCCTCGCGCGCCGCTTCGGCTTCACGCGCTACGAGGCGGGTGCGTTCATCCTCAAGTTCCCACACGTCTTCGAAATCTTTGAGCACCCC 333 0.5315 MRVFASRTSNFFKRNLENFPYNFNFFREFAQSTAIPKKQLRVRDHGYDNYMEVEKKTRKVLKFQSIILSEPSQSLPISRLETLARRFGFTRYEAGAFILKFPHVFEIFEHP 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0103 111 Pfam Plant organelle RNA recognition domain 42 110 IPR021099 GO:0003723
Pvu1g0103 111 PANTHER PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 13 111 IPR040295 -
Pvu1g0103 111 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 13 111 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0103 Pvu-Chr1 870465 870964 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0103 - - pvu:PHAVU_001G0100001 226.868