Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0084 ATGTCCGCAAAATGCAGCCAAATCCGACACATCGTTCGGCTCCGCCAGATGCTGCGGCGCTGGCGCAACAAAGCTCGCATGTCTGCCAACCGCATACCGTCAGATGTGCCTGCAGGACACGTGGCCGTCTGCGTGGGCACCAACCTCACCAGATTCGTGGTGCGCGCGACGTACCTGAACCACCCCGTCTTCAAGAAGCTCCTCCTTCAAGCTGAAGAAGAGTACGGTTTCTCCAACCCCGGTCCACTGGTCATCCCCTGCGACGAAACTCTCTTCCACGAGGTTCTCCGGTTCATCTCCTGGTCCGAGTCAGAAAAACCGAACCGGTTCGTGAACCTCGAACTTGACGACTTAAAACGACACTGCCACGTAAGATTCAACAACAACCTCGATTTCTGGCCAGAGTCCAGACCGCTCCTGCACGGTCCGAGTGACAAAACCGTTTGGTAA 450 0.5622 MSAKCSQIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTNLTRFVVRATYLNHPVFKKLLLQAEEEYGFSNPGPLVIPCDETLFHEVLRFISWSESEKPNRFVNLELDDLKRHCHVRFNNNLDFWPESRPLLHGPSDKTVW* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0084 149 PANTHER SMALL AUXIN-UP RNA-RELATED 5 142 - -
Pvu1g0084 149 Pfam Auxin responsive protein 13 98 IPR003676 GO:0009733
Pvu1g0084 149 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 142 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0084 Pvu-Chr1 670915 671364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0084 3 148 Calmodulin-binding Proteins AT4G34750 50.000 3.05e-43 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0084 K14488 - gmx:100789753 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0084 1 670915 671364 Pvu9g0160 9 2455480 2456169 PCT