Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0049 ATGGTTCATCTTACTAAGCTCTTTTCTTCTTCTTCTTCTTCTTCCTTTCAGTTTCTTTCTTCCTACATGCTTCGTTTTATACTGTTGCTGCTATTTGTTTGCTGCAAAACAGAGGGTTTGTTGAAACTGCCACCAAATGTGTCGGTTCCAGCAGTGTTTGTGTTTGGAGATTCAGTGGTGGACACAGGCAACAACAACAACAGAACAACATCATTTGCTAGGTCTAACTTCCCTCCATATGGGAGAGACTTTCAAGGTGGCATTCCAACTGGTAGATTTAGCAATGGAAAGGTTCCATCAGACCTTATAGTTGAAGAGTTGGGAATTAAGGAGTTTCTGCCACCATATTTAAAGCCCAATCTTCAGCCTAGTGATTTGGTCACAGGGGTCTGTTTTGCTTCAGGTGGCTCAGGATACGACCCTTTGACATCCGTAATAGAGGGATCAATCCCAGTGAGTGGGCAACTGGATTTGTTCAAAGAATACATAGGAAAGCTGAAAGGTGTGGTTGGAGAAGAAAGAGCAAAGTTTATCTTAGCCAACAGTCTTTTCATTGTGGTAGCAGGAAGCAGTGACATTTCCAACACCTATCGCACTCGTTCTCTGCTCTATGATCTTCCTTCTTACTCTGATCTTCTCCTCAACTCAGCTTCTAAGTTTTTAACGGAATTGAATGAGTTAGGTGCAAGGAGGATCGCAGTATTCAGTGCACCTCCAATTGGGTGTTTGCCATTTCAGAGAACAGTGGGGGGTGGAATAGAGAAAAAGTGTGCACAAAGGCCCAACAACTTGGCCCAATTATTCAACACCAAATTGTCCAACCTCTTGCATTCTCTCAATCGCAACTTTCCCAATAGCAGAAATGTTTTCATCAATATTTATGATCCTCTGCTTGACATTATCCTCAATTACCAAAAATATGGGTATAAAGTTGGGGACACTGGATGCTGTGGCACAGGGAGAATAGAGGTTGCAATATTATGCAACAGTTTGGATTCCACTTGTTCAAATGTTCATGATTATGTGTTTTGGGACAGTTTTCATCCCACAGAAAGCGTTTACAAAAGGCTCATAGCTCCTATTCTTCAAAAATATTTGTACCAATTCAAGTGA 1113 0.4142 MVHLTKLFSSSSSSSFQFLSSYMLRFILLLLFVCCKTEGLLKLPPNVSVPAVFVFGDSVVDTGNNNNRTTSFARSNFPPYGRDFQGGIPTGRFSNGKVPSDLIVEELGIKEFLPPYLKPNLQPSDLVTGVCFASGGSGYDPLTSVIEGSIPVSGQLDLFKEYIGKLKGVVGEERAKFILANSLFIVVAGSSDISNTYRTRSLLYDLPSYSDLLLNSASKFLTELNELGARRIAVFSAPPIGCLPFQRTVGGGIEKKCAQRPNNLAQLFNTKLSNLLHSLNRNFPNSRNVFINIYDPLLDIILNYQKYGYKVGDTGCCGTGRIEVAILCNSLDSTCSNVHDYVFWDSFHPTESVYKRLIAPILQKYLYQFK* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0049 370 Gene3D SGNH hydrolase 44 366 IPR036514 -
Pvu1g0049 370 Pfam GDSL-like Lipase/Acylhydrolase 52 357 IPR001087 GO:0016788
Pvu1g0049 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 19 368 - -
Pvu1g0049 370 PANTHER GDSL ESTERASE/LIPASE EXL3 19 368 - -
Pvu1g0049 370 CDD SGNH_plant_lipase_like 50 365 IPR035669 -
Pvu1g0049 370 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 52 63 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0049 Pvu-Chr1 399427 405819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0049 46 363 Pollen Coat Proteome AT1G75910 40.123 3.57e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0049 - - gmx:102667991 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0186 9 3221224 3230232 Pvu1g0049 1 399427 405819 PCT