Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0047 ATGAAGTTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTTTTGTCAGTGGTTGTCTTAGTTGTTATCTGCAAAAGCTGTGAGTCTGTAAAACTTCCAGCAGATGTTTCAGTTCCTGCAGTGTTGGTGTTTGGAGATTCGATAATGGACACTGGCAACAACAACAACAAATTGGCAACATCAGCAAGGTGCAATTTCTCACCATATGGCAAAGATTTTAAGGGAGGGATCCCTACTGGCAGATTTTGCAATGGAAAGGTTCCTTCAGACTACATAGCTGAAGAATTGGGCATAAAAGAGTTTCTTCCAGCATACTTGGATCCAAATCTCGAACCTGATGAATTGGGCACTGGTGTTTGCTTTGCATCTGGTGGTGCAGGATACGATCCTTTAACATCAGAAACTGCAGGATCAATACCACTATCTGGTCAACTACAAATGTTCAAAGAATACATAGTGAAGCTAAAAGAACATGTTGGAGAGAACAGAACAAACTTCATCCTAAGCAACAGTTTTTTCTTCATCGTTTTAGGCACCAATGACATTTCCAACACCTACTTCTTGTCCCATCTTAGAGAACTGCAATATGATCTTCCTGCATACTCTGACTTTTTGGTTAACTCAGCTTCCAATTTCCTCAAGGAAATATATGAACTGGGTGCACGAAGGATTGCAGTATTCGGTGGGCCACCAGTTGGGTGTGTGCCATATCACAGAACATTGTCTGGTGGAAGAGAAAGAAAATGTATACAGAAGTACAACGATGCAATGATGTTCTTTAACGATAAACTGATGAAAGAGTTACATTCCCTTAATCAGAAACTTCCAAACAGTAGAATTGCTTACCTCGATGTCTACAGCCCTTTACTTGATATCTTTCAAAACCACCAAAAATATGGGTACGAAGTCGCAGACAGAGGGTGTTGTGGAACAGGAACTCTGGAGGTTGCATTGACATGCAACCATTTGGATGCCACTTGTCCTAATGTTTTGGATTATGTCTTTTGGGACGGTTTTCACCCTACTGAAAGCGTTTACAAAAAGCTTGTGCCCAAAATTCTACAGGAATATATAAACCAGTTACAGTGA 1104 0.4031 MKFPSSSSSSSSSSSSSFLLSVVVLVVICKSCESVKLPADVSVPAVLVFGDSIMDTGNNNNKLATSARCNFSPYGKDFKGGIPTGRFCNGKVPSDYIAEELGIKEFLPAYLDPNLEPDELGTGVCFASGGAGYDPLTSETAGSIPLSGQLQMFKEYIVKLKEHVGENRTNFILSNSFFFIVLGTNDISNTYFLSHLRELQYDLPAYSDFLVNSASNFLKEIYELGARRIAVFGGPPVGCVPYHRTLSGGRERKCIQKYNDAMMFFNDKLMKELHSLNQKLPNSRIAYLDVYSPLLDIFQNHQKYGYEVADRGCCGTGTLEVALTCNHLDATCPNVLDYVFWDGFHPTESVYKKLVPKILQEYINQLQ* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0047 367 Gene3D SGNH hydrolase 33 364 IPR036514 -
Pvu1g0047 367 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 46 57 IPR008265 GO:0006629|GO:0016298
Pvu1g0047 367 Pfam GDSL-like Lipase/Acylhydrolase 46 354 IPR001087 GO:0016788
Pvu1g0047 367 SUPERFAMILY SGNH hydrolase 176 360 - -
Pvu1g0047 367 PANTHER GDSL ESTERASE/LIPASE EXL3 19 365 - -
Pvu1g0047 367 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 19 365 - -
Pvu1g0047 367 CDD SGNH_plant_lipase_like 44 362 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0047 Pvu-Chr1 383632 386853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0047 42 366 Pollen Coat Proteome AT1G75910 39.634 2.29e-70 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0047 - - gmx:100777186 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0047 1 383632 386853 Pvu9g0186 9 3221224 3230232 PCT
Pvu9g0188 9 3316110 3318492 Pvu1g0047 1 383632 386853 PCT