Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0043 ATGGCTGCAACAACACCGAATCACACAGTAACTGTATCTGGGTGGGCAGCACACGATTCTTCCGGCAAGATTAGCCCCTACACCTTCAAAAGAAGGAAGAATGGTGTCAACGATGTAACCATAAAGATCTTGTACTGTGGGATCTGCCACACTGATCTACACTACGCTAAAAATGAATGGGGCATCACCATGTACCCTGTGGTGCCAGGACACGAGATCGTTGGGGTGGTGACTGAGGCAGGAAGCGATGTGAAGGGGTTCAAGGAAGGAGACAGAGTGGGTATAGGGTGTATGGCAGCTTCATGTTTGGATTGTGAACACTGCGAGACTGGTCAGGAAAACTACTGTGAGAAGATGGAATTTGTGTACAACGGAATCTTCTGGGATGGCAGCATCACCTACGGTGGCTACTCCCAACTCATTGTTGCAGATCACAGGTTTGTGGTACACGTTCCGGAGAGCCTACCGATGGACGCGGCGGCTCCTCTGCTTTGCGCCGGAATAACAGTGTTCAGTCCTTTGAAAGATCACGATCTGGTGGCGACGGGGGGGAAAAAGATTGGGGTGGTTGGTTTGGGAGGGCTGGGACACTTAGCCGTTAAATTCGGGAAGGCATTTGGGCACCATGTTACTGTGATTAGCACTTCTCCTTCGAAAGAGGAAGAAGCTAAGCAACGTTTGGGTGCTGATGATTTCATAATCAGCACAAACCCAGAACAGTTAGCGAAAGCAAAGAGAAGCCTTGATTTCATACTGGACACTGTTTCTGCAGAGCACCCTCTCTTATCCATCTTGGAGTTGCTGAAAGTCAAAGGCACCTTGTTTCTGGTCGGAGCACCCGACAAGCCCCTGCAACTGCCTTCTTTTCCATTGATTATGGGGAAGAGATCAGTAAAAGGTGGGATCATAGGAGGAATAAAAGAGACTCAGGAAATGTTGGATGTGTGTGCCAAGTACAACATAACGAGTGACATTGAATTGATCACAGCAGATAGAATCAACGAAGCCATTGAACGTGTTGCCAAGAATGATGTTCGCTACCGTTTCGTGATTGACATTGCTGCTGCTTCCAAGGAGTAG 1080 0.4833 MAATTPNHTVTVSGWAAHDSSGKISPYTFKRRKNGVNDVTIKILYCGICHTDLHYAKNEWGITMYPVVPGHEIVGVVTEAGSDVKGFKEGDRVGIGCMAASCLDCEHCETGQENYCEKMEFVYNGIFWDGSITYGGYSQLIVADHRFVVHVPESLPMDAAAPLLCAGITVFSPLKDHDLVATGGKKIGVVGLGGLGHLAVKFGKAFGHHVTVISTSPSKEEEAKQRLGADDFIISTNPEQLAKAKRSLDFILDTVSAEHPLLSILELLKVKGTLFLVGAPDKPLQLPSFPLIMGKRSVKGGIIGGIKETQEMLDVCAKYNITSDIELITADRINEAIERVAKNDVRYRFVIDIAAASKE* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0043 359 Gene3D - 15 353 - -
Pvu1g0043 359 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Pvu1g0043 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Pvu1g0043 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Pvu1g0043 359 CDD CAD1 14 352 - -
Pvu1g0043 359 SMART PKS_ER_names_mod 22 351 IPR020843 GO:0016491
Pvu1g0043 359 PANTHER ALDEHYDE REDUCTASE 1 356 - -
Pvu1g0043 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Pvu1g0043 359 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 356 - -
Pvu1g0043 359 Gene3D - 166 323 - -
Pvu1g0043 359 SUPERFAMILY GroES-like 17 183 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0043 Pvu-Chr1 356066 357964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0043 14 356 Monolignol Biosynthesis Gene Families AT2G21890 57.726 8.57e-144 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0043 K00083 - gmx:100820588 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0043 1 356066 357964 Pvu1g0043 1 356066 357964 ECH