Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0042 ATGTCATGTACCAGGTGGCTTTCTTCTCTACCAAAAACAACAGGTAGAGCACGGAAAGAATGTGAGGAAGACAGGTTGTGTAAGAAGCGAAGCGTGAATGAGGAGTATTTGGAAGCATTCAGAACAAAGTCTTACATGGAAATATGCAACAAAGCACAAGTGGGTCTTGGAAAGACAACCACCAAAATGCTAACTTCCTCTTCATCTTCCTCTTCTTCTTCTTCTGCAGTTCCCTTATGCATGCAGCTTACAGAATACTTACTTGATCCTCGGCAAGAGACGATAGCAAACATATCGCAGAGGTTGAAGCTGCACCGTCTTCTTGTGGAGTACTTCGAAGCCACCTTGGAAGCGTGTCGTTTTTGTGACACAATCCTTGAAGCCATCCATTCAGTAAGACTTGCTTATCGACGAATTGCAAGAATTGCTAAGCTAAGCAAAATCGCCAATAATCACGACCAAACCCACAGAGATACCATCTACAGAGAGCTTTCTTCATTCGCTTCGCAGACCAACCCTTTCTCTGCTGTCAGCACCCTGCAGTTCCGTGACATTCACGACAAGTGCGTGGAGCTTCTGAACAGACTGAAACAAACGAGAAGGAAGATCAGAAGGAGGCTGAAACTGAAGAGGGTGTGCAAGAAGGTTGGTGGAATCGCTCTTGTTGCTTCACATTGTGTGGTTCTTGCTGGTTTGTTGGTGATTGCTTTTCACAGTGTAGTTGGGGTGGTGGTGGCGCCTAGTATTCTGGGTGGTTTGGTTGGTTTGTTGGCGAAGAGGGGTGGTGGAAGGGTGGGGTGCAGAGGTTCTGAGAGGGTGTGTGAGCAACTTGATGTGGCTGCAAAAGGGATTTATATAGTGATAAATGATTTGGACACGATGAGTAGGATGGTGAAGAGATTAGAGGACGAGGTGGAGCATAGGAAAATGGTTGCAGAGGTTGGTGCGAGGAATGGGAAGTGGGAGATTGTGAAGCAGGTGATGAGGGAGTTTCATGAACGTGATTCTAGCTTTGTGGAGCAGTTGGAAGAGCTTGAGGGACATATCTACCTGTGTTTTCTCACCACAAACAGATCCAGAAGGCTTCTGGTGCAAACAATTACAGAGAAAAAGTAA 1116 0.4606 MSCTRWLSSLPKTTGRARKECEEDRLCKKRSVNEEYLEAFRTKSYMEICNKAQVGLGKTTTKMLTSSSSSSSSSSAVPLCMQLTEYLLDPRQETIANISQRLKLHRLLVEYFEATLEACRFCDTILEAIHSVRLAYRRIARIAKLSKIANNHDQTHRDTIYRELSSFASQTNPFSAVSTLQFRDIHDKCVELLNRLKQTRRKIRRRLKLKRVCKKVGGIALVASHCVVLAGLLVIAFHSVVGVVVAPSILGGLVGLLAKRGGGRVGCRGSERVCEQLDVAAKGIYIVINDLDTMSRMVKRLEDEVEHRKMVAEVGARNGKWEIVKQVMREFHERDSSFVEQLEELEGHIYLCFLTTNRSRRLLVQTITEKK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0042 371 Pfam Protein of unknown function (DUF677) 57 367 IPR007749 -
Pvu1g0042 371 PANTHER UPF0496 PROTEIN 3-RELATED 16 370 IPR007749 -
Pvu1g0042 371 PANTHER UPF0496 PROTEIN 2-RELATED 16 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0042 Pvu-Chr1 348460 350089 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0042 - - gmx:100790505 508.064