Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0030 ATGTACTGCACCTTGTCATTTCCCTGTGTTCATTTTGTTCCGGTGGGAAGAACTTGTTGCAACTACAGAAGAGTCACTTTAGCAGCACATTCAAAAAGAAGACCACCAAAGGATAGCCGGTATCGACCATCAAAGGATAACCGGAATCGACCACCAAAGGATAACCGGTATCGACCACATCCTAAGCAACCTCCAGATTTTGGTGTTAATTTATTCTTGAAGAAGCCTAGCACCACCTCTAAACCAACTGAGGCTGATTTTGATATCAATCAAGAGAATGATGAAGTGGAGGATGAAAATATTGGTGTTGTTTGGGAATCAGATGAGCTTGAAGTCATCTCATCACTTTTCCAAGGTAGAATTCCGCAAAAGCCTGGAAAATTACATCGAGAAAGGCCTCTTCCTCTCCCAGCTCCCTACAAACTCCGACCTTTGGGACTACCTAAACCAAAAACACAAGTAAAATTGACAGCTCCAGCTGTGGTTTCTTCTCGGGCTTCTATGACTAAGAAAGTGTACAAAAGCCCGCGTTTCCTAGTTGGACTGGCAAGAGAAATGAGTAGGCTTGGTCCAGCTGAAGATGTATCTAAAGTTCTTGGAAAGTGGGTGCAGTTCCTGAGGAAAGGGTCCCTGTCATTGACAATAAGGGAATTAGGTCATATGGGATTCCCTGAGAGAGCTTTGCAAACATTCTTATGGGCACAAAATCAACCTCATCTCTTCCCTGATGATTGGATTCTGGCATCAACTGTTGAGGTCTTGGCCAGGAATCATGAGTTGAGAATTCCATTCAACATTGACCACTATACTGGTCTGGCAAGTCGTGCTGTATTGGAGGCAATGATCAAGGGTTTTATAAAAGGAGGGAACCTTAGACTTGCCTGGAAGGTTCTAGTAGTTGCCAGAAGGGATAAAAGAATGCTGGATTCAAGTATTTATGCCAAGTTAATATTAGAACTTGGAAAGAACCCTGACAGACACAGGCATGTGTTGCCCTTGTTAGATGAACTTGGAGAACGAGATGAATTGAATTTAAGCCAGCAAGATTGTACTGCTATAATGAAAGTATGTATTAAGATGGGAAAATTTGAAGTAGTTGAGAGCCTGTTTAGTTGGTTCAAGCAGTCTAGCTATCAACCAAGCGTAGTTATGTTCACTTCTGTTATTCACAGCCGTTATACAGAGAAGAAATACAGAGAGGCATTGGCTGTAGTTTGGGAGATGGAGTCTTCTAATTGCCTTTTTGACCTTCCTGCTTATCGTGTGGTAATAAAACTGTTTGTTGCTCTGAATGATCTATCTAGGGCCATGAGATACTTTTCAAAACTTAAAGAAGCTGGATTTTCTCCCACCTTTGGCTTATACAAGGACATGCTTCAAATTTACATGGCCTCTGGGAGGACTGCAAAGTGCAAAGAGATCTGCAAGGAGGCTGATATAGCAGGATTCAAGCTAGATAAATATCAAGTGTCACAGATAAATGAAAATTTGTAG 1494 0.4177 MYCTLSFPCVHFVPVGRTCCNYRRVTLAAHSKRRPPKDSRYRPSKDNRNRPPKDNRYRPHPKQPPDFGVNLFLKKPSTTSKPTEADFDINQENDEVEDENIGVVWESDELEVISSLFQGRIPQKPGKLHRERPLPLPAPYKLRPLGLPKPKTQVKLTAPAVVSSRASMTKKVYKSPRFLVGLAREMSRLGPAEDVSKVLGKWVQFLRKGSLSLTIRELGHMGFPERALQTFLWAQNQPHLFPDDWILASTVEVLARNHELRIPFNIDHYTGLASRAVLEAMIKGFIKGGNLRLAWKVLVVARRDKRMLDSSIYAKLILELGKNPDRHRHVLPLLDELGERDELNLSQQDCTAIMKVCIKMGKFEVVESLFSWFKQSSYQPSVVMFTSVIHSRYTEKKYREALAVVWEMESSNCLFDLPAYRVVIKLFVALNDLSRAMRYFSKLKEAGFSPTFGLYKDMLQIYMASGRTAKCKEICKEADIAGFKLDKYQVSQINENL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0030 497 PANTHER TETRATRICOPEPTIDE REPEAT-LIKE SUPERFAMILY PROTEIN 68 473 - -
Pvu1g0030 497 Gene3D Tetratricopeptide repeat domain 275 495 IPR011990 GO:0005515
Pvu1g0030 497 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 416 450 IPR002885 -
Pvu1g0030 497 MobiDBLite consensus disorder prediction 31 61 - -
Pvu1g0030 497 MobiDBLite consensus disorder prediction 30 69 - -
Pvu1g0030 497 PANTHER MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1 68 473 - -
Pvu1g0030 497 Pfam Pentatricopeptide repeat domain 377 427 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0030 266 484 Miscellaneous Gene Families AT4G11690 22.624 2.41e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0030 - - gmx:100816513 872.848