Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0020 ATGTTGTCATTAAGTCGGCATATTCTAAATCCTTGTACCAGACATTCAAATCTCGCCTCCTTAAATTCCACCACAACAACCTTAATCTTCTTCAAATCGCATTCTCCTTCTCTTCTTCGGTTTTCTTCAATACCTAAGACCAAAACAATGGTTTCCCTTTCCGCTCGGCACCAACCAATCCAATATCCCACTGCTCGCAGAGACCACTCCGTCGTTGACCACTTCCACGGCGTCAACATCACCGATCCTTACCGATGGCTGGAGAATCCGGAGGCGGAGGAAGTGCAAGAGTTCGTGCAGAAACAGGTGGCGTTGACGGATTCGGTGCTGCAGAGTTGCGAGTGCAGGGGCAAGCTGGCGGATAAGATAACGAAGCTCTTTGATAATCCTCGTTACAACGCTCCCTTCCGGCGAGGGAATAAGTACTTTTACTTCCACAACACGGGTCTTCAGGCGCAGAGCGTGCTTTACTTGCAGGACAGTTTGGAGGCTGAGGCTCAGGTTTTGCTCGATCCCAATGCGTTCAGTGAAGATGGAACTGTCTCCCTCAACACGCTGTCCGTGAGCAAAAATGCCGAGTTCTTGGCGTATGGACTTAGTTCCAGTGGTAGCGACTGGGTCACAATAAAACTCATGCGTATTCAGGACAAGAGTGTTCAGTCTGATACTTTATCTTGGGTCAAGTTTTCCTCCATTAGTTGGACGCATGATAGCAAAGGTTTCTTTTACAGTCGCTATCCAGCTCCAAAGAATGGAGAAGTGGCAGATGCTGGGACTGAAACTAATGCGAACCTTCATCATGAACTCTATTATCATTTTTTGGGTACTGATCAATCGGAAGACATTCTGTGTTGGAGAGATCCTGAAAATCCTAAACATATGTTTGGAGGAAGTGTTACCGAGGACGGGAAGTATCTTCTTCTGTATATTGAAGAAGGGTGTGATCCAGTTAACAAGCTTTACTACTATGACTTGTCTGAACTTCCAAACGGGCTGGAAAGTTTTCGAAATGAAAATTCCCTCCTTCCATTTGTCAAGCTTGTTGATAAATTCGATGGACAATATCATGCCATTGCAAATGATGACACCTTGTTTACATTTTTAACTAACAAAGATGCTCCAAAATATAAAATAGTTCGAGTAGATTTGAAAGAACCAAATGCTTGGACTGATGTTATCCAAGAGTCTGAAAAAGATGTGCTTGAGTCAGCACGTGCTGTAAATGGTAACAAACTTATTGTGAGCTACTTGAGTGATGTGAAATATGTTCTGCAAGTCAGAGACTTGGAAACAGGTTCCTTGCAACATCAATTACCAATTGACATTGGCACAGTCAGTGAAATTTCTGGGCGGCGTGAAGATTCCGAGGTTTTCATTGGTTTTACAAGCTTTTTGACTCCTGGAATCATATATCAGTGCGACCTGAGAACACAAATTCCTGATATGAAGATATTTCGTGAGATTGTCGTCCCTGGGTTTGACCGCTCTGAGTTTCAAGTCAATCAGGTTTTTGTGCCTAGTAAAGACGGCACCAAGATTCCAATGTTTATTGTTGCCAAAAAGGATATTGTTTTGGATGGTTCACACCCTTGTCTGCTATATGGATATGGCGGCTTTAACATCAGTCTTACACCATATTTCAACATCAGTCGTACTGTACTGGCGAGACATTTAGGTGTTGTTTTCTGCATAGCAAATATTCGTGGTGGTGGAGAATATGGGGAGGATTGGCACAAAGCTGGCTCCCTTGCAAACAAGCAAAACTGTTTTGATGACTTCATTTCAGCAGCTGAATATCTTGTATCTGCTGGTTATACCAAACCAAAGAAGTTATGCATCGAGGGTGGAAGCAATGGTGGACTTCTTGTTGGTGCTTGCATAAATCAAAGACCTGACCTTTTCGGTTGTGCACTGGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAATTTACGATAGGTCATGCTTGGACCACAGATTATGGTTGTTCAGACAAGGAGGAAGAATTTCATTGGCTAATCAAGTACTCTCCATTGCATAACGTCCAGAGACCTTGGGAAAAGCATCCCAATCAGTCAATTCAATACCCATCGACAATGCTGTTGACTGCTGATCATGATGATCGTGTTGTGCCATTGCATTCATTAAAGCTATTGGCGACCTTGCAGTATGTCCTCGTTAATAGTCTTGATGAAAGTCCCCAGACGAACCCTATAATTGGTCGCATTGAATGCAAGGCTGGGCATGGTGCAGGGCGTCCAACAAAGAAAATGATAGATGAAGCTGCTGACCGGTACAGTTTCATGGCCAAAATGTTAGATGCGCATTGGATTGAGTAG 2343 0.4362 MLSLSRHILNPCTRHSNLASLNSTTTTLIFFKSHSPSLLRFSSIPKTKTMVSLSARHQPIQYPTARRDHSVVDHFHGVNITDPYRWLENPEAEEVQEFVQKQVALTDSVLQSCECRGKLADKITKLFDNPRYNAPFRRGNKYFYFHNTGLQAQSVLYLQDSLEAEAQVLLDPNAFSEDGTVSLNTLSVSKNAEFLAYGLSSSGSDWVTIKLMRIQDKSVQSDTLSWVKFSSISWTHDSKGFFYSRYPAPKNGEVADAGTETNANLHHELYYHFLGTDQSEDILCWRDPENPKHMFGGSVTEDGKYLLLYIEEGCDPVNKLYYYDLSELPNGLESFRNENSLLPFVKLVDKFDGQYHAIANDDTLFTFLTNKDAPKYKIVRVDLKEPNAWTDVIQESEKDVLESARAVNGNKLIVSYLSDVKYVLQVRDLETGSLQHQLPIDIGTVSEISGRREDSEVFIGFTSFLTPGIIYQCDLRTQIPDMKIFREIVVPGFDRSEFQVNQVFVPSKDGTKIPMFIVAKKDIVLDGSHPCLLYGYGGFNISLTPYFNISRTVLARHLGVVFCIANIRGGGEYGEDWHKAGSLANKQNCFDDFISAAEYLVSAGYTKPKKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTTDYGCSDKEEEFHWLIKYSPLHNVQRPWEKHPNQSIQYPSTMLLTADHDDRVVPLHSLKLLATLQYVLVNSLDESPQTNPIIGRIECKAGHGAGRPTKKMIDEAADRYSFMAKMLDAHWIE* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0020 780 Gene3D alpha/beta hydrolase 71 770 IPR029058 -
Pvu1g0020 780 SUPERFAMILY alpha/beta-Hydrolases 498 724 IPR029058 -
Pvu1g0020 780 SUPERFAMILY Peptidase/esterase 'gauge' domain 59 478 - -
Pvu1g0020 780 Pfam Prolyl oligopeptidase family 546 775 IPR001375 GO:0006508|GO:0008236
Pvu1g0020 780 ProSitePatterns Prolyl endopeptidase family serine active site. 592 622 IPR002471 GO:0004252|GO:0006508
Pvu1g0020 780 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 63 478 IPR023302 GO:0004252
Pvu1g0020 780 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 530 548 IPR002470 GO:0004252|GO:0006508
Pvu1g0020 780 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 557 581 IPR002470 GO:0004252|GO:0006508
Pvu1g0020 780 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 585 604 IPR002470 GO:0004252|GO:0006508
Pvu1g0020 780 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 615 635 IPR002470 GO:0004252|GO:0006508
Pvu1g0020 780 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 697 719 IPR002470 GO:0004252|GO:0006508
Pvu1g0020 780 PANTHER PROLYL OLIGOPEPTIDASE-LIKE PROTEIN 46 780 - -
Pvu1g0020 780 Gene3D - 130 489 - -
Pvu1g0020 780 PANTHER PROLYL ENDOPEPTIDASE 46 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0020 Pvu-Chr1 243578 247706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0020 K01322 - gmx:100812955 1391.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0020 1 243578 247706 Pvu1g0020 1 243578 247706 ECH
Pvu1g0020 1 243578 247706 Pvu9g0215 9 4154784 4161187 PCT