Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0015 ATGGAGGAGCAAATAGACCCAAGGAGTGGCTTCTGCCCCTCCAACTCAGTTTTCTACAGCAAGCGGAAGCCACTCCCACTCTCTCCCAACAACGCCCTCGACGTCACCACCTTCATCTCCTCCCGAGCCCACCGCGGAACCACCGCCTTCATCGACGCCGCCACAGGCCGCCACCTCAGCTACAGCCAGCTATGGCGAGCGGTGGAGGGCGTGGCGGGCTCTCTCTGGGACATGGGGATCCGAAAGGGCAACGTGGTCCTGCTCCTCTCTCCCAACTCCATCGACTTCCCGGTGGTGTGCCTGGCCATCATGTCCCTGGGCGCCGTCATCACCACCACCAATCCCCTCAACACCACGCAGGAAATCGCCAAGCAGATCGCCGATTCCAAGCCCCTCCTCGCCTTCACCACCCCTCTCTTGCTCCCCAAACTCACCAAGGCAGCACCCTCTCTACCAATCATTCTCATGGACACCACCGCTCACCCACCCCTTCCTCACCCCAAAATTGTAGCCACGCTCCATGAAATGGCCAAGAAGGAACCCCGGGCTGAGCGCGTGAGGGAGCGCGTGGAGCAGGACGACACGGCCACGCTGCTCTACTCCTCCGGCACCACGGGACCCAGCAAGGGCGTGCTTTCCTCCCACCGGAACCTCATAGCCATGGTTCAAATCGTTCTCGGTCGCTTCCACGTCGAAGACAACGAAACCTTCATCTGCACGGTCCCCATGTTTCACATATACGGTCTCGTCGCCTTCGCCACCGGCCTCCTCGCCTCCGGCTCCACCATCGTCGTCCTCTCCAAGTTCGAGATGCACGACATGCTCTCGTCCATACAGAGGTTCCGCGCCACCTACCTTCCCCTGGTTCCACCCATTCTGGTTGCCATGCTCAACAACGCAGACGCCATCAAGGGAAAGTACGATATCCGGTCCCTGCATTCGGTCCTCTCCGGTGGGGCTCCCTTGAGTAAGGAGGTTATAGAGGGGTTTGTCGACAAGTACCCCAACGTCACCATCCTTCAGGGTTATGGTTTGACGGAATCCACCGGCGTTGGTGCCTCCACCGACTCCTTGGAGGAGAGTCGCAGGTACGGCACTGCGGGCCTCTTGTCGCCGGCCACCCAAGCCATGATCGTCGACCCTGACTCCGGCCGCTCGCTTCCGGTTAACAGCACCGGTGAGCTCTGGCTCAGGGGTCCCACTATTATGAAAGGTTATTTCAATAACGAAGAGGCCACAACATCAACACTTGATTCAAAAGGATGGTTAAGAACAGGGGATGTTTGTTACATTGACAATGATGGATTTATATTCATTGTGGATCGATTAAAAGAGCTTATCAAATACAAGGGATATCAGGTGCCTCCAGCAGAACTGGAGGCCTTGTTACTGACTCATCCTGCTATATCAGATGCAGCTGTTATCCCGTATCCAGATAAGGAGGTTGGGCAGTTTCCAATGGCATATGTGGTGAGGAAGGATGGAAGTAGCTTATCAGAAAGCCAAGTTATGGATTTTGTAGCAGGACAGGTGGCTCCTTACAAACGGATTCGAAAAGTTGCGTTTATCTCCTCCGTACCCAAAAATCCATCTGGCAAAATTCTTCGCAAGGATCTCATCAAGCTCGCAACTTCTAAACTTTGA 1644 0.556 MEEQIDPRSGFCPSNSVFYSKRKPLPLSPNNALDVTTFISSRAHRGTTAFIDAATGRHLSYSQLWRAVEGVAGSLWDMGIRKGNVVLLLSPNSIDFPVVCLAIMSLGAVITTTNPLNTTQEIAKQIADSKPLLAFTTPLLLPKLTKAAPSLPIILMDTTAHPPLPHPKIVATLHEMAKKEPRAERVRERVEQDDTATLLYSSGTTGPSKGVLSSHRNLIAMVQIVLGRFHVEDNETFICTVPMFHIYGLVAFATGLLASGSTIVVLSKFEMHDMLSSIQRFRATYLPLVPPILVAMLNNADAIKGKYDIRSLHSVLSGGAPLSKEVIEGFVDKYPNVTILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPATQAMIVDPDSGRSLPVNSTGELWLRGPTIMKGYFNNEEATTSTLDSKGWLRTGDVCYIDNDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPAISDAAVIPYPDKEVGQFPMAYVVRKDGSSLSESQVMDFVAGQVAPYKRIRKVAFISSVPKNPSGKILRKDLIKLATSKL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0015 547 SUPERFAMILY Acetyl-CoA synthetase-like 41 545 - -
Pvu1g0015 547 CDD 4CL 25 539 - -
Pvu1g0015 547 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
Pvu1g0015 547 Pfam AMP-binding enzyme 42 449 IPR000873 -
Pvu1g0015 547 Gene3D - 17 444 IPR042099 -
Pvu1g0015 547 PANTHER BNAA06G14440D PROTEIN 7 546 - -
Pvu1g0015 547 Gene3D - 445 546 IPR045851 -
Pvu1g0015 547 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Pvu1g0015 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0015 Pvu-Chr1 204982 207864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0015 5 547 Monolignol Biosynthesis Gene Families AT1G20500 65.146 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0015 K10526 - gmx:100811344 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0015 1 204982 207864 Pvu1g0015 1 204982 207864 ECH