Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0014 ATGCATATGCATAGATTCAGAGCAAGGGTTTTTCTGCGCTCAATTTCACTTTGTAAATCTAAGTGGCATCAACATCATGGTGCTCAATTTCTCTTCTCTCAAAATCGCACCTCCACAACAGGTCCAAAATTTATGGAATTTGCAGCAGAACCATCTATGCAGTTGCAAGTTCTTAAGGCACTCTGCTCGGGTCAGAGAAAGAAGGCTTCGGACTTACTTTTGGATTTTGGTTCCAGAACCCAGTCATTAACAGCTGACGATTTTCTTCATATTTTTAAGTTTTGTGCACGCTCTCCTGATCCAGTGTTTGTAATGGAGATTTGGAGATTCATGGAGTTAAAAGGTGTTAGAATGAACGATACATGCTCATCTCTTATGATGCAGGCCCTTTGTAAAGGGGGTTACTTGGAGGAGGCCTTTGATATCATGGATTTTCTTGGAGGAAGTCAATGTCTCTATCCAGTTCTCCCACTTTACAATAGTCTCTTAGGATCCTGCTCGAAAATGCAGAGTCTAATTCTAGCAAACAAATGTTTGGACTTAATGGAAAAGAAGATGGTAGGGAAGAGTGAAGTTACATACACTGAGCTTCTCAAGCTTGCAGTTTTGCTGAAAGACTTGCCAGCAGCCCATCTTGTTTGGCAGGAGTATGTGAAAAACTATAGCATGAGTATCATTGCTCTGCGTAGATTCATTTGGTCATTTACAAGGTTAGGAGATTTAGAATCTGCTTGTAAAACTCTACAACAAATGGTGTCATTAGCGGTCAGGGGAAACATTTCTATTGCTAAAACAGTTTATGGGAAGTTGTATTCTACTAGAATGGACATCCCTGTGCCTTCAAATAAGGGGCTAGGCTTAACCATATCAGACTTTAAGGAGATAAAAAAATTGGACTCTTGTATGAGTGCTGAATTAGATGGGCTGAATGGAGAAGAACACTCACTACTTGTGAAGGCGTTGAGGTGGTCCTTTAATGACATAATACACGGGTGTGCAAACCAAAAGAATTATATACTTGCAAGGAAGCTTATCTTACAGATGGAAAATCTCGGTTTGCAGCCATCCTGCCATTCATATAATGGCATTATTAAAGCAGTTGCTTCCCATGGAAGTCTTGGGGATGCCATAGAAGTGTTGAAAAAAATGCAGCAGAAGAATTTGAAGCCAAATGATTCAACTTTAGCAACACTTTCAATCACATGCAGCAAAACACAACAGTTAGATTTAGCTGAGGCTTTTCTGAATCAGATTTCCGAATGTCTATATCCACATCCTTATAATGCTTTACTAGCATCATGCAATGAATTGAATCAACCTGAACGTGCTGTGCAAGTGTTTGCCAAGATGAAGCAGAAAAAAGTTTTGCCTAATATCAGGACTTGTGAGCTTCTATTTTCGTTATTTGGTGTTGTAAATGCCCCTTATGAAGACAGTAATATACTGTCACAGGTGGATGCTGCTAAAAGAATAAATGCTATAGAAAAATATATGGCCACAAATGGCATTCAGCACAGTCATCTTTCAATAAAAAACATAGTTAGAGCCCTTGGAGAAGAAGGGATGATAAGAGAGATGATCCAGTATTTACACGTGGCAGAGAATCTTTTCATTTATAGAAATCCTTCATTGGGAACACATATTTACAACACAGTGTTACATTATCTTGTCAAAGCCAAAGAAAGTGATTTGGCGATTGCAATTTTCAAGAAGATGAAGTTATGTGGCTGCGACCCTGACTCTGAAACATACAATATAATGATTAACTGTTGTACCATCCTAAAAAGTTACAGATCTGCTTGTTTGCTGATTTCAACGATGATACGGAAAGGGTTTTGCCCAGTGATATGTACATATACCGCTATCATTAAGATTTTGTTGGAAGATGAGAACTTTGATGAAGCCCTGAATCTTTTGAAACAAGTCATATTGGATGGCATCCAACCTGATATACTGCTGTACAATACGGTTCTTAAACAAGCATGTTACAAGGGAAGGATTGATGTAATTGAGTTAATTGTGGAGGGCATGCGCAGAGAAAAAGTTCCCCCCGATCCAAGAACATGCGGCTATGTGTTCTCTGCATATGTAGATTCTGGTTTCCACAATACAGCAATTGAAGCATTGCAGGTTTTAAGTTTGCGTATGATGTCTGAAGATGGCAACCTACTTGGAGAGAAGAAAAAAATTGTGAATGAATTCATCCTGTCTGAAGATTTGGCTTCTGAGTCACGGATACTCAAGTTATTTGAAGATTCTGAAGATGAATTTGCTGTTGGGTTGTTGAATTTAAGATGGTGTGCCATAGCTGGATTCCCAATCTGCGAGTCAGCTGATCAAAGTCTGTGGGCTAGAAGACTGGAAGGAAAACGATTGTGA 2379 0.3913 MHMHRFRARVFLRSISLCKSKWHQHHGAQFLFSQNRTSTTGPKFMEFAAEPSMQLQVLKALCSGQRKKASDLLLDFGSRTQSLTADDFLHIFKFCARSPDPVFVMEIWRFMELKGVRMNDTCSSLMMQALCKGGYLEEAFDIMDFLGGSQCLYPVLPLYNSLLGSCSKMQSLILANKCLDLMEKKMVGKSEVTYTELLKLAVLLKDLPAAHLVWQEYVKNYSMSIIALRRFIWSFTRLGDLESACKTLQQMVSLAVRGNISIAKTVYGKLYSTRMDIPVPSNKGLGLTISDFKEIKKLDSCMSAELDGLNGEEHSLLVKALRWSFNDIIHGCANQKNYILARKLILQMENLGLQPSCHSYNGIIKAVASHGSLGDAIEVLKKMQQKNLKPNDSTLATLSITCSKTQQLDLAEAFLNQISECLYPHPYNALLASCNELNQPERAVQVFAKMKQKKVLPNIRTCELLFSLFGVVNAPYEDSNILSQVDAAKRINAIEKYMATNGIQHSHLSIKNIVRALGEEGMIREMIQYLHVAENLFIYRNPSLGTHIYNTVLHYLVKAKESDLAIAIFKKMKLCGCDPDSETYNIMINCCTILKSYRSACLLISTMIRKGFCPVICTYTAIIKILLEDENFDEALNLLKQVILDGIQPDILLYNTVLKQACYKGRIDVIELIVEGMRREKVPPDPRTCGYVFSAYVDSGFHNTAIEALQVLSLRMMSEDGNLLGEKKKIVNEFILSEDLASESRILKLFEDSEDEFAVGLLNLRWCAIAGFPICESADQSLWARRLEGKRL* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0014 792 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 423 457 IPR002885 -
Pvu1g0014 792 Pfam Pentatricopeptide repeat domain 345 391 IPR002885 -
Pvu1g0014 792 Pfam Pentatricopeptide repeat domain 427 470 IPR002885 -
Pvu1g0014 792 Pfam Pentatricopeptide repeat domain 604 659 IPR002885 -
Pvu1g0014 792 Pfam PPR repeat family 546 591 IPR002885 -
Pvu1g0014 792 Gene3D Tetratricopeptide repeat domain 59 277 IPR011990 GO:0005515
Pvu1g0014 792 Gene3D Tetratricopeptide repeat domain 426 643 IPR011990 GO:0005515
Pvu1g0014 792 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 580 614 IPR002885 -
Pvu1g0014 792 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 650 684 IPR002885 -
Pvu1g0014 792 TIGRFAM PPR: pentatricopeptide repeat domain 548 581 IPR002885 -
Pvu1g0014 792 TIGRFAM PPR: pentatricopeptide repeat domain 583 614 IPR002885 -
Pvu1g0014 792 TIGRFAM PPR: pentatricopeptide repeat domain 358 391 IPR002885 -
Pvu1g0014 792 TIGRFAM PPR: pentatricopeptide repeat domain 427 458 IPR002885 -
Pvu1g0014 792 TIGRFAM PPR: pentatricopeptide repeat domain 617 651 IPR002885 -
Pvu1g0014 792 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 545 579 IPR002885 -
Pvu1g0014 792 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 356 390 IPR002885 -
Pvu1g0014 792 Gene3D Tetratricopeptide repeat domain 317 425 IPR011990 GO:0005515
Pvu1g0014 792 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 615 649 IPR002885 -
Pvu1g0014 792 Gene3D Tetratricopeptide repeat domain 644 715 IPR011990 GO:0005515
Pvu1g0014 792 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1 789 - -
Pvu1g0014 792 Pfam PPR repeat 124 144 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0014 Pvu-Chr1 194851 202568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0014 324 721 Glycosyltransferase AT1G05670 21.197 6.67e-20 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0014 - - vun:114194590 1434.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0014 1 194851 202568 Pvu1g0014 1 194851 202568 ECH