Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0006 ATGGTTTCGCTTCATCCTTTGTCAGTTTCCTCTTCTTCCTCTGACTTTTTCAGATCAGTAAGTTTTGCCCCGAAACGAAGAAACAGCTCCAAAACAGAGCAGCCTTCTTTCTCCTGCAATGCTTCGTGGCAAGAGCTTGCCGGAGTTTTACTATTCTCAGCTATTCCTTTCACTGCCGTGAAAGCCATAGCTAATAGTCCGCTAGGAGAGTTGCTTCAGAGGAAAATGGAGGAGAAAAAGAAATTTGCTGTAGAAAACTCGTCTAAATTCAAGGAATTAGCCAACAAAGCTCGAAAGGAGAGCTCTTGGTATGGAGAGGATCGGCCTCGTTGGCTTGGTCCTATATTGTATGAATACCCATCATATCTTACTGGGGACTTGCCTGGGGATTATGGCTTCGACATTGCGGGGCTAGGCAAGGATCCTGTGGCTCTGCAGAAATACTTCAATTTTGAGATATTGCATGCTCGGTGGGCTATGCTTGCGTCTATTGGAGCTCTGATTCCAGAAATATTAGACCTATTGGGAGCCTTTCACTTTGTAGAACCTGTATGGTGGCGTGTTGGTTATTCAAAGCTCAAGGGAGATACTCTGGATTACCTTGGCATCCAAGGCCTCCACTTTGCTGGAAGTCAGGGAGTGGTCGTCATTGCTATTTGCCAAGCACTCCTTATGGTTGGACCGGAATACGCTAGATATTGTGGGACTGAGGCATTGGAGCCTCTAGGGATATACCTGCCCGGTGATATAAATTATCCTGGAGGAGCTTTGTTTGATCCCTTGAATCTGTCCAACGATCCCGAAGCCTTTGAAGAGCTGAAGGTAAAAGAAATTAAAAATGGACGCTTGGCAATGGTTGCCTGGTTAGGCTTTTACGTGCAAGCAGCACTGACGGGTAAAGGTCCTGTTCAGAACCTCATTGATCACATCTCCGATCCTTTCCACAACAACTTTCTGGACTCCCTCAACATGATGAAATTCGTCATGTAA 990 0.4576 MVSLHPLSVSSSSSDFFRSVSFAPKRRNSSKTEQPSFSCNASWQELAGVLLFSAIPFTAVKAIANSPLGELLQRKMEEKKKFAVENSSKFKELANKARKESSWYGEDRPRWLGPILYEYPSYLTGDLPGDYGFDIAGLGKDPVALQKYFNFEILHARWAMLASIGALIPEILDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIQGLHFAGSQGVVVIAICQALLMVGPEYARYCGTEALEPLGIYLPGDINYPGGALFDPLNLSNDPEAFEELKVKEIKNGRLAMVAWLGFYVQAALTGKGPVQNLIDHISDPFHNNFLDSLNMMKFVM* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0006 329 Pfam Chlorophyll A-B binding protein 120 295 IPR022796 -
Pvu1g0006 329 Gene3D Chlorophyll a/b binding protein domain 110 321 - -
Pvu1g0006 329 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 37 319 - -
Pvu1g0006 329 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 37 319 IPR001344 GO:0009765|GO:0016020
Pvu1g0006 329 SUPERFAMILY Chlorophyll a-b binding protein 102 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0006 Pvu-Chr1 134609 140566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0006 25 323 Chloroplast and Mitochondria Gene Families AT1G76570 76.589 1.41e-175 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0006 K14172 - gmx:100786260 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0006 1 134609 140566 Pvu1g0006 1 134609 140566 ECH