Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2237 ATGCCTTCGATCATGTCACCCCAGTGGCAAGACAAGGCTGCTGGTTTCCTTTCTTCCTCCGGAGTCAAGCTTAAAGAAGCCAAGGAATCAGCCGGAACATTTGTTGGTGAGGTCACCAAGGATACAAAAAGTAATGTGTCTGAAGTGGCTGGACGAGTGGGGTCAATGGTCAAGAGTCGGTGGGCACTTCTCCAGCAGCCATCCACAAGACATGCTGTGCAGGATCGCTTGATATCAGCGGCTGCTACAACTGGCACGCTCCTGAGGAGAGGCTTCTCAGGGACAAAGGATAAGGTGGTTGTGGGAAAGTCCAAGGTTGAAGAGGTGGCAAAAATTACAGCACAAAAAAGTAAGACTATCTTGACAGATATTGAAAGATGGCAAAAGGGAGTTGCAAGCACTGACGTATTTGGAGTTCCAATTGAGGTTACTGTGCAGAGGCAAGATTACTGCAAACCTATTCCTCAGATATTGGTCAATTGTGCAGATTATCTTATAGTTTCAGGTTTGAACTCGCCATATCTTTTTAAATCTGAAGGGAATAAAAGGGTTATTCAACAGTTGGTTTCTCTATACAACCAAGATTCTACTGCTTCAGTACCAGAAGGCACGAATCCTGTTGATGTAGCAGCTCTTGTGAAATATTACCTTGCTAGCCTTCCTGAGCCACTTACCACATTAGAGCTTTATAATGAGATTAGAGGTGCTCGGTCCAGTATATATTCCACAAGAAACATACTCAAGAGGCTTTCCAGTGTAAACTACATGACTCTAGAGTTTATAACTGCACTTCTACTCCGTGTTAGCCAGAAGTCACTTCTCAACAAGATGGATGCTCGGACCCTAGCTATTGAAATGGCACCTGTTATTATGTGGCAAAAGGAAAGCAGACCTGAATTTTATCGTCAATATTGGAATCAAATGTCAAAAAGTCCTTCCGAAAAGAGTGTAGATACACCACTTGATAATACTGCCTGGGACATGCTTGCTGATGATGGCGAAGCCATAGATGCATCATCTCCTATTCCTTTGGATGATGGCACGCCAGTAGACTTTGGTGCAATTGAAGTTATTCAGTTGCTAGTGGAGCATCATAATGCAATCTTCACAGATGCAAATGAGACAGTCTGGAAATGA 1137 0.4354 MPSIMSPQWQDKAAGFLSSSGVKLKEAKESAGTFVGEVTKDTKSNVSEVAGRVGSMVKSRWALLQQPSTRHAVQDRLISAAATTGTLLRRGFSGTKDKVVVGKSKVEEVAKITAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQRQDYCKPIPQILVNCADYLIVSGLNSPYLFKSEGNKRVIQQLVSLYNQDSTASVPEGTNPVDVAALVKYYLASLPEPLTTLELYNEIRGARSSIYSTRNILKRLSSVNYMTLEFITALLLRVSQKSLLNKMDARTLAIEMAPVIMWQKESRPEFYRQYWNQMSKSPSEKSVDTPLDNTAWDMLADDGEAIDASSPIPLDDGTPVDFGAIEVIQLLVEHHNAIFTDANETVWK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2237 378 SMART RhoGAP_3 152 334 IPR000198 GO:0007165
Pvu11g2237 378 PANTHER AUXIN-REGULATED PROTEIN-LIKE 1 378 - -
Pvu11g2237 378 ProSiteProfiles Rho GTPase-activating proteins domain profile. 139 369 IPR000198 GO:0007165
Pvu11g2237 378 CDD RhoGAP 155 299 - -
Pvu11g2237 378 Gene3D Rho GTPase activation protein 92 376 IPR008936 GO:0007165
Pvu11g2237 378 PANTHER AUXIN-REGULATED PROTEIN-LIKE 1 378 - -
Pvu11g2237 378 Pfam RhoGAP domain 155 294 IPR000198 GO:0007165
Pvu11g2237 378 SUPERFAMILY GTPase activation domain, GAP 134 297 IPR008936 GO:0007165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2237 - - gmx:100794806 684.871