Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2230 ATGTATGGGGAAATTGATATGGAGACCCAAATTCATCAGCTTGAGCAAGAAGCTTACAGTTCAGTTCTAAGAGCCTTTAAAGCTCAAGCCGACGCCATTACTTGGGAGAAAGAAAGTTTGATTACAGAGCTGAGAAAAGAACTGAGATTGTCAAATGAGGAGCACAGGGAACTTCTTGGTCGAGTTAATGCAGATGATGTGATCCGGAGGATAAGGGAGTGGAGACAGACAGGAGGCCATCAGCCTGGTGTACTTAGTACTGGTCAAGGTCTTCATGACTCAGTTCCCAGTCCCACGGTCTCTGCTTCTCGCAAGAAGCAGAAGATTGCACCATCTGTACCATCACGATCTTTCGCCGGGCCTTCTCCTCCATTTCACCCCCAACCAGTTACTGCGCCCCACCAACCATCTTCTTCTGCAGCAAAACGAGGATCTGTTCCTGGATCAAAGGGAAAGAAACACAAACCAGGTCAAATATTACCTGGTGTCTCTTCGATGAAGCAGTATCCTTCCACTGGACCGGGTGGAAGGGCTCAAGTGCCTAATAGAGCTGTCACTGGTGAGCATGCAGAGGGAGCATCATTTGACTCTTTGGTTGGTAGGAGAGTGCGGACAAGATGGCCTGACGATAATAATTTTTATGAAGCTGTTATCACAAACTACAATCCAGCTGATGGACGTCACAATCTGGTCTATGACATGGGGAGTGCAAATGAAACATGGGAATGGGTTAATCTTTCAGAGATATCTCCTGAAGATATTCAGTGGGTTGGTGAAGATCCGGGAATCAATCATCGTGGGGGTTTTGGGGGCTCTGGTCATGGGATGAATAGGTCTGTTGGACGAGATGGTGTTCCTGGAGGTGGAAGAGGTAGGGGAGCTACAAAGGGGCAATCAAGAAAGGATTTTTTGTTATCACAAAATGGCATAGGAAAGAAGGCACCCGATGATATACAAATACTTCACACAGATACACTAATCAAGGAGGTGGAGAGGGTATTCAGTGCAAATCATCCTGATCCCCTTGAAATTGAGAAAGCAAAGAAGGTATTGAAGGATCATGAACAGGCTCTTATTGATGCAATTGCAAGACTTAATGATCTTTCTGATGGTGAAAGTGATGGGGCTGGCCATCATTTCTCACATGCTCAATCAATGGATCGAGAGTGA 1170 0.459 MYGEIDMETQIHQLEQEAYSSVLRAFKAQADAITWEKESLITELRKELRLSNEEHRELLGRVNADDVIRRIREWRQTGGHQPGVLSTGQGLHDSVPSPTVSASRKKQKIAPSVPSRSFAGPSPPFHPQPVTAPHQPSSSAAKRGSVPGSKGKKHKPGQILPGVSSMKQYPSTGPGGRAQVPNRAVTGEHAEGASFDSLVGRRVRTRWPDDNNFYEAVITNYNPADGRHNLVYDMGSANETWEWVNLSEISPEDIQWVGEDPGINHRGGFGGSGHGMNRSVGRDGVPGGGRGRGATKGQSRKDFLLSQNGIGKKAPDDIQILHTDTLIKEVERVFSANHPDPLEIEKAKKVLKDHEQALIDAIARLNDLSDGESDGAGHHFSHAQSMDRE* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2230 389 MobiDBLite consensus disorder prediction 117 131 - -
Pvu11g2230 389 Coils Coil 41 61 - -
Pvu11g2230 389 PANTHER PROTEIN EMSY-LIKE 4 1 389 IPR033485 GO:0050832
Pvu11g2230 389 SUPERFAMILY Tudor/PWWP/MBT 197 237 - -
Pvu11g2230 389 MobiDBLite consensus disorder prediction 370 389 - -
Pvu11g2230 389 Gene3D ENT domain 2 115 IPR036142 -
Pvu11g2230 389 SMART ENT_2 7 80 IPR005491 -
Pvu11g2230 389 MobiDBLite consensus disorder prediction 371 389 - -
Pvu11g2230 389 SUPERFAMILY ENT-like 2 119 IPR036142 -
Pvu11g2230 389 Pfam ENT domain 9 76 IPR005491 -
Pvu11g2230 389 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 7 94 IPR005491 -
Pvu11g2230 389 PANTHER PROTEIN EMSY-LIKE 3-LIKE ISOFORM X2 1 389 - -
Pvu11g2230 389 MobiDBLite consensus disorder prediction 78 181 - -
Pvu11g2230 389 Gene3D - 192 243 - -
Pvu11g2230 389 Coils Coil 344 364 - -
Pvu11g2230 389 MobiDBLite consensus disorder prediction 268 301 - -
Pvu11g2230 389 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2230 Pvu-Chr11 49954842 49960744 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2230 - - gmx:100791651 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2230 11 49954842 49960744 Pvu11g2230 11 49954842 49960744 ECH