Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2228 TTCAAACCAAGTTTGAGAATTGAGTTCATTCAGATTTTGAACGGCTTAAGGTTGTTCTTCTCCTTGCAACATTTTCTTTTTTTTCACTCTGCAGCTTCTCTTAATCGGAGCAGTTTTCCACCATATTTCTTCTTTGGAACAGCTTCTTCAGCCTACCAGTATGAAGGTGCTTCACATGAAGGTGGTAAAGGCCCTAGTATATGGGACACATTCACTCATAGCCACCCAGATAAAATAGCAGATCACAGTAATGGAGATGTTGCCGTTGATTCATACCACCGCTACAGGGAGGATGTGGCCATGATGAAGGATATTGGATTCAATGCCTACAGGTTCTCCATCTCTTGGACAAGAATACTACCTCGAGGAAACCTGAAGGGAGGAGTTAACAGAGAAGGCATTGCATATTACAATAATCTCATAAAGGATCTCATAGCAAATGGACAACAACCTTTTATAACTCTATTTCACTCTGATTTCCCTCAAGCTCTTGAAGATGAATATGGTGGTTTTCTAAATCCCAGAATTGTTCAGGATTTTGCAGATTATGCAGAAGTATGCTTCAGGGAATTTGGTGACAGGGTTAAGCACTGGATTACACTAAATGAGCCAGTTTTCTATAGCACTGAAGGTTATGGAAATGGTGGATCCCCACCCAATAGATGCTCCAAGTGGGTTGCTAACTGCACGGCTGGTGATTCTTCCACTGAGCCCTATGTGGTTACGCACCACCTCATTCTTTCTCATGCTGCAGCAGTAAAAGTTTACAGGGAGAAGTTCCAGGTTTCTCAGAAGGGTCAAATTGGGATAACATTGAATTCTGCTTGGGTTTTGCCACTTTCTCAATCAAAAGAGGACATAGAAGCTGCATATAGAGGTCTTGCTTTTATGTATGACTGGTTTATGGAACCACTTTACTCCGGCACATATCCTGCTATAATGGTAAAAAATGTTGGAGAACGTTTGCCAAAATTTACCAGAAGCGAATTTTTTATGGTTAAAGGGTCCTTTGATTTCATAGGGGTAAATTATTACACTTCAACTTATGCAACTAGTGCTCCTTGCCCACGTGAAAGACCAACTTTCTTCACAGATCCTTGTGTTAGATTTACCACTCTAAGAAATGGAGTTCTCATTGGTCCAAAGGCAGCCTCAGACTGGCTCTATGTCTATCCACCAGGAATTCAAGGTCTACTAGAATACACTAAGGCGAAATTTAACAACCCTGTTATTTACATAACAGAAAATGGAATTGATGAGGTTAATGATGGAAAAATTCAGCTTAATGACATAACAAGGATAGATTACATCAGTCACCACATTTTGTACCTTCATAGGGCCATAATGAATGGAGTGAGGGTGAAAGGATACTTTGCATGGTCATTTTTGGACAATTTTGAATGGACTGCTGGCTACACTCTTCGGTTTGGACTGGTGTATGTTGATTACAAGAATGGACTCAAAAGATACCGTAAAAGATCAGCTTTGTGGTTCAAAATATTTCTTCACCAATGA 1515 0.402 FKPSLRIEFIQILNGLRLFFSLQHFLFFHSAASLNRSSFPPYFFFGTASSAYQYEGASHEGGKGPSIWDTFTHSHPDKIADHSNGDVAVDSYHRYREDVAMMKDIGFNAYRFSISWTRILPRGNLKGGVNREGIAYYNNLIKDLIANGQQPFITLFHSDFPQALEDEYGGFLNPRIVQDFADYAEVCFREFGDRVKHWITLNEPVFYSTEGYGNGGSPPNRCSKWVANCTAGDSSTEPYVVTHHLILSHAAAVKVYREKFQVSQKGQIGITLNSAWVLPLSQSKEDIEAAYRGLAFMYDWFMEPLYSGTYPAIMVKNVGERLPKFTRSEFFMVKGSFDFIGVNYYTSTYATSAPCPRERPTFFTDPCVRFTTLRNGVLIGPKAASDWLYVYPPGIQGLLEYTKAKFNNPVIYITENGIDEVNDGKIQLNDITRIDYISHHILYLHRAIMNGVRVKGYFAWSFLDNFEWTAGYTLRFGLVYVDYKNGLKRYRKRSALWFKIFLHQ* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2228 504 SUPERFAMILY (Trans)glycosidases 26 499 IPR017853 -
Pvu11g2228 504 PANTHER GLYCOSYL HYDROLASE 22 502 IPR001360 GO:0004553|GO:0005975
Pvu11g2228 504 PRINTS Glycosyl hydrolase family 1 signature 336 350 IPR001360 GO:0004553|GO:0005975
Pvu11g2228 504 PRINTS Glycosyl hydrolase family 1 signature 411 419 IPR001360 GO:0004553|GO:0005975
Pvu11g2228 504 PRINTS Glycosyl hydrolase family 1 signature 430 441 IPR001360 GO:0004553|GO:0005975
Pvu11g2228 504 PRINTS Glycosyl hydrolase family 1 signature 451 468 IPR001360 GO:0004553|GO:0005975
Pvu11g2228 504 PRINTS Glycosyl hydrolase family 1 signature 475 487 IPR001360 GO:0004553|GO:0005975
Pvu11g2228 504 Gene3D Glycosidases 23 504 - -
Pvu11g2228 504 PANTHER BETA-GLUCOSIDASE 16 22 502 - -
Pvu11g2228 504 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 43 57 IPR033132 -
Pvu11g2228 504 Pfam Glycosyl hydrolase family 1 37 501 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2228 Pvu-Chr11 49942429 49947114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2228 5 504 Glycoside Hydrolase AT5G44640 57.256 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2228 - K01188 gmx:100791121 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2228 11 49942429 49947114 Pvu11g2228 11 49942429 49947114 ECH