Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2213 ATGAACCAACTGTGGTTAGATGAAGAGAAAAAGCATCAGAAAATGGAAGAAAGCAAAGGAAGAGTTTGTGTTACAGGAGGAACAGGTTTTATTGGTTCATGGTTAGTCAAGAGACTCCTTCAAGATGGTTATTCTGTCAACACAACTGTGAGACACAACTCAGAACACAGGAAAGATGTTAGCTTTCTTAAGAGCTTACCTGGAGCATCGCAGAGGCTTCAAATTCTGAGTGCTGATCTGAACAATCCAGAAAGTTTTGGTGCAGCCATTGAAGGGTGTAGTGGAGTTTTCCATGTTGCTACCCCAGTTGACTTTGAACTAAGAGAACCAGAAGAAGTAGTGACCAAAAGATCCATTGATGGAGCACTTGGTATTTTGAAGGCATGCCTCAATTCCAAGACTGTGAAAAGAGTTGTTTACACCTCTAGTGTCTCTGCTGTGATTTTCAATGGCAAAGAAGAAATGATGGATGAATGTTCTTGGAGCGATGTGGATTATCTCAGAGCTTCAAAACCATTTGGTTGGTCATATGCGGTTTCAAAGACTTTGACAGAAAAGACAGTGCTTGAATTTGGAGAACAGAATGAATTGGATGTTGTGACACTAACTCCCACTTTTGTTTTTGGACCCTTCATTTGTTCAAAGCTTCCTAGCTCAGTCCATGCTACACTGAATTTTGCTTTTGGCAGGAAAGGACCGTTTGGTTTGATACTTGAGACGCCAATGGTGCATGTGGAGGATGTGGCTAGAGCACATATATTTCTGCTGGAACAGTCTAATGCAAAAGGGAGGTATAATTGTTCACAATGCTTGGTGACTTATGAAAGGATGTCTGAACTTGTTTATGCCAAATACCCAAAAGTTCAACCACCAAACTTAGACTCGTTGAAACAAGTTGAAGGTATCAAGATACGAGATTTATGTTCAAAGAAGCTAATAGATGCAGGATTCGTGTTCAACTATGGAGTAGAGAAAATGATTGATGATGCAATTGAATGCTGCCAAGAAAAGGGTTACCTGTAA 1023 0.4027 MNQLWLDEEKKHQKMEESKGRVCVTGGTGFIGSWLVKRLLQDGYSVNTTVRHNSEHRKDVSFLKSLPGASQRLQILSADLNNPESFGAAIEGCSGVFHVATPVDFELREPEEVVTKRSIDGALGILKACLNSKTVKRVVYTSSVSAVIFNGKEEMMDECSWSDVDYLRASKPFGWSYAVSKTLTEKTVLEFGEQNELDVVTLTPTFVFGPFICSKLPSSVHATLNFAFGRKGPFGLILETPMVHVEDVARAHIFLLEQSNAKGRYNCSQCLVTYERMSELVYAKYPKVQPPNLDSLKQVEGIKIRDLCSKKLIDAGFVFNYGVEKMIDDAIECCQEKGYL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2213 340 PANTHER VESTITONE REDUCTASE-LIKE 20 332 - -
Pvu11g2213 340 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 334 IPR036291 -
Pvu11g2213 340 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 20 332 - -
Pvu11g2213 340 CDD FR_SDR_e 22 317 - -
Pvu11g2213 340 Gene3D - 19 340 - -
Pvu11g2213 340 Pfam NAD dependent epimerase/dehydratase family 22 267 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2213 Pvu-Chr11 49730523 49732695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2213 16 332 Miscellaneous Gene Families AT4G27250 37.313 1.21e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2213 - K13265 gmx:100786878 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2213 11 49730523 49732695 Pvu11g2213 11 49730523 49732695 ECH