Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2195 ATGAGTTATGTTCAAGAAAATGATACACTGAATTCTCTTTATGAGGTTTCACTGAGAGGTAGTGTATTTGAGTTAGAAACTCTTATTGGAAGAGACCCTCTTATCCTTCACAAACTTTCCTTAACAACTTTCACTGAAACTCCCTTACACATATCAGCTTTACTTGGCCACCTTGACTTCACAAAGTTCCTTCTAACTCACAAACCTCAACTTGCTCTTGAGATGGACCACTGCAAACGCACCCCTCTTCATCTGGCTTCTGCAGAAGGCCATGCAGAGATTGTTCATGTGTTGCTGCAAACATGTGAAGATGCATGCTTGGTGAGTGACCAAGATGGAAGAATCCCTCTTCATTATGCAACTATGAGAGGAAGAACAGAGGTTGCAAGAAAGTTGATTGGTGCAGCAAAGTCAGAATCAGTTATGGTGTTTGATGGATCAGGAAAAACTATGTTCCACCTTTGTGTTGAGCACAATCACTTGGATACCTTGAAGACATTGGTGCAAGTTGGAGATGTTAGGGAGGATTTTCTTAACTCTGGAGACTTACATCATGGAAATACCATTCTCCATCTGGCTGTTATGTTCAAGCAAATTGAGACTGTAAGGTACTTGCTATCAATATCCAAAATAAGAGAAGAAGCAAATATTGAGAACAAGATGGGTTATACTGCTTTGGACATTATAGAGCAGGTTCCAAAAGACACCAGAAGTCTTCAAATAAAACTCATGTTGATGGATGCTGGATTCAAAAACAATGGAAAGAGCCAAGTACATCATCCACCATCTGCATCAATCATAGATGTTACTCCATCAAGAACACTGAATCCAAATGAAAAGTCTTGGAGAAAGTCTTTGAAGCGTGTGAACAAGCTCTTGCTACAAAAGAGTGATAGGTTGGAAGAAATGAGAGGGATGTTGAGTTTGGTGGCTACAATGATCTCAACCGTGACCTTTGGTGTTGTGATGAACCCACCAGGTGAAAATTTAACTCCAATGTTACAATTTCAATTTCGAGAAATGTTCACAAGTTTGTTAACCATGAACACCATCTCTTTCATTTCATCACTTGGTGTCACTCTCTTACTTATAAGTGGAGTTCCCTTAAAGAATGAAGTCACAATGGGGTTCTTATCAGTAGGCACAAGTGTCTCTCTCACATTCCTTGTGCTTACTTACATACATGCTGTGCCTTTTAGCCGATTTAAGTATTTTGGAGAAACATTTTCTGTGTTGTTTTCTTGGCTTGGAATTTTTGGGGCAATAGCTGTGTTTATCATAATTCGTGTAGTTTCTAGGATAGTGAAAGTTTTGTAG 1317 0.3918 MSYVQENDTLNSLYEVSLRGSVFELETLIGRDPLILHKLSLTTFTETPLHISALLGHLDFTKFLLTHKPQLALEMDHCKRTPLHLASAEGHAEIVHVLLQTCEDACLVSDQDGRIPLHYATMRGRTEVARKLIGAAKSESVMVFDGSGKTMFHLCVEHNHLDTLKTLVQVGDVREDFLNSGDLHHGNTILHLAVMFKQIETVRYLLSISKIREEANIENKMGYTALDIIEQVPKDTRSLQIKLMLMDAGFKNNGKSQVHHPPSASIIDVTPSRTLNPNEKSWRKSLKRVNKLLLQKSDRLEEMRGMLSLVATMISTVTFGVVMNPPGENLTPMLQFQFREMFTSLLTMNTISFISSLGVTLLLISGVPLKNEVTMGFLSVGTSVSLTFLVLTYIHAVPFSRFKYFGETFSVLFSWLGIFGAIAVFIIIRVVSRIVKVL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2195 438 Pfam Domain of unknown function 299 396 IPR026961 -
Pvu11g2195 438 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 19 435 - -
Pvu11g2195 438 PANTHER HOMEOBOX PROTEIN WARIAI 19 435 - -
Pvu11g2195 438 Gene3D - 4 239 IPR036770 -
Pvu11g2195 438 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Pvu11g2195 438 Coils Coil 283 303 - -
Pvu11g2195 438 Pfam Ankyrin repeats (3 copies) 40 100 IPR002110 GO:0005515
Pvu11g2195 438 Pfam Ankyrin repeats (3 copies) 112 171 IPR002110 GO:0005515
Pvu11g2195 438 ProSiteProfiles Ankyrin repeat region circular profile. 112 133 - -
Pvu11g2195 438 ProSiteProfiles Ankyrin repeat region circular profile. 78 100 - -
Pvu11g2195 438 SMART ANK_2a 44 73 IPR002110 GO:0005515
Pvu11g2195 438 SMART ANK_2a 112 143 IPR002110 GO:0005515
Pvu11g2195 438 SMART ANK_2a 147 176 IPR002110 GO:0005515
Pvu11g2195 438 SMART ANK_2a 185 214 IPR002110 GO:0005515
Pvu11g2195 438 SMART ANK_2a 78 107 IPR002110 GO:0005515
Pvu11g2195 438 SUPERFAMILY Ankyrin repeat 22 230 IPR036770 -
Pvu11g2195 438 ProSiteProfiles Ankyrin repeat profile. 185 207 IPR002110 GO:0005515
Pvu11g2195 438 ProSiteProfiles Ankyrin repeat profile. 112 133 IPR002110 GO:0005515
Pvu11g2195 438 Pfam Ankyrin repeat 185 206 IPR002110 GO:0005515
Pvu11g2195 438 ProSiteProfiles Ankyrin repeat region circular profile. 185 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2195 Pvu-Chr11 49390481 49392462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2195 20 327 Miscellaneous Gene Families AT4G10720 28.000 4.98e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2195 - - gmx:100796407 475.322