LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu11g2189	ATGGGGAAGATAGAAAAAAAAATGAAGGCAATGACACAACCTTTTCTATCACCCTTCAGCTCATCATCTTTGATGGCTATCCTCCTGGTCATCACCATTCTCTTCTCCTTCTCCTCTCCTTCATTAGCCCTTCCTCCCTCAGAATCCTTCCAACCAAGAGACAATTTCCTCATTGATTGTGGTGCAGATGTTCAATCCACCCTCCCTGATGGAAGACAATTCAAAACAGACCCTCAAGCAAGTTCTTTCTTGAATGCCAATGATGAGTTCAAAATCAATGCACAAGATAGCAAATTATCCTACCCTGTGTACAAGAGTGCAAGGATCTTCATCCAGGAAGCAAGATACTCCTTCCATCTGGTTCAGCCAGGTTTTCACTGGGTTCGGCTTCATTTCTACCCCATCAAGAACAACATCTTTGATCTCCAAAAGGCCACTTTCTCCATCTTCACAGATGCCTATGTGCTCCTCCACAGTTTCAATGTCAACAACACTGACAAGCCAATCCTCAAGGAGTACCTCATCAATGCAACTGAGCCTCAATTCACCCTTTCCTTCATTCCCCTGAAGAACTCTGCTGCATTCATCAATGCCATTGAGGTTGTTTCAGCTCCTGATGAACTCATCTCTGACACTGCCACTGATCTTTTCCCTGTTGGCGAGTTCTCAGGCATCACTGCCTATGGCTTGCAGCCTGTTTTCAGGGTCAACAATGGAGGCCCTCTCATCACCTCATCAAATGACACCCTTGGGAGGACTTGGGAATCTGATGAACCTTTTCTCACAAACAAGAATTTGGCCAAGAAGGCCTCGGTGGCAACCACTGCTGTTAAATTCCCTCAACACAACCCTGCAATCTCCCCTCTCACTGCTCCACAAACTGTGTATGCCTCTGTCACTGAGATGGCTGATGCTGGTGTTAATCAGCCAAATTTCAATGTCTCATGGAAATTTGATGTGGACAATTCTTTCTGCTACCTTGTTAGGCTGCACTTCTGTGACATTGTTAGCAAAGGGCTGAATCAACTCTACTTCAATGTGTATGTTAATGGGAAAACAGCAATCTCCAACTTTGATTTATCAGCAGTCACAGGTGCCTTGTCAACCCCCTATTTCAAAGACATTGTGGTGAATGCAACACTGATAGGGGAGGAGGGGCTATCAATTCAGGTTGGTCCAGCTACTGGTGTTGGTGGAAGTGCCAATGCCATTGTGAATGGTATAGAGGTGATGAAGATGAGCAACTCTGTGAATAGTTTGGATGGAGAATTTGGAGTTGATGGAAGAAGTATTAGTGGTTCAAACAGAGGAACAGTGGCAGCAGTTGGATTTGCCATGATGTTTGGAGCCTTTGTTGGGCTGGGAGCCATGGTGGTCAAGTGGCACAAGAGGCCTCAAGACTGGCAGAAGAGGAACAGCTTCTCTTCATGGCTGCTGCCTCTGCATGCTGGTGACACAAGCTTCATGAGCAGCAAGAACTCAATGGGAAAGAGCAACTTCTTCTCCTCATCAATGGGACTAGGCAGGTACTTCTCCTTGTCTGAACTTCAGGAGGCAACCAAGAACTTTGACTCAAAGAACATCATTGGTGTTGGTGGATTTGGCAATGTGTATTTGGGTGTGATAGATGAGGGGACTCAAGTGGCAGTCAAGAGAGGGAACCCTCAATCAGAGCAAGGCATCAATGAATTCCAGACTGAAATCCAAATGTTGTCCAAGCTCAGACACAGGCACTTGGTGTCCTTGATTGGATACTGTGATGAGAATGATGAGATGATCCTGGTTTATGAGTACATGCCTAGTGGACACTTCAGAGACCATCTTTATGGAAAGAACATGCCTCCTCTCTCATGGAAGCAAAGGCTAGAGATCTGCATTGGTTCAGCTCGTGGTCTTCACTACCTTCACACAGGCACAGCTCAAGGCATCATCCACCGTGATGTCAAGACCACCAACATCTTGCTTGATGAGAATTTGACTGCCAAGGTTTCTGATTTTGGACTTTCCAAGGATGCACCAATGGGGCAGGGTCATGTCAGTACTGCAGTGAAGGGTAGCTTTGGATATCTTGACCCTGAGTACTTCAGGAGGCAGCAACTCACAGAAAAATCTGATGTATACTCATTTGGGGTGGTTCTGCTTGAGGCACTCTGTGCAAGGCCAGCCATCAACCCTCAGTTGCCCCGTGAGCAAGTAAACTTGGCTGATTGGGCTATGCAGTGGAAGAGAAAGGGCTTGCTTGACAAGATCATAGACCCTCTCCTTATTGGATCCATCAATCCTGAATCCATGAAGAAGTTTGCTGAGGCTGCTGAGAAGTGTTTGGCTGATCATGGAGTGGATAGGCCTTCAATGGGAGATGTTTTGTGGAACTTGGAGTATGCTTTGCAGCTTCAAGAGGCCTTCACACAAGGAAAAGCTGAAGATGAGACAAAGTCATCTGCAGCTGCTCCTACTTCACCACATGTTCCACCAACACCTTCCACTCCTTCTGATGACCCTCCGGCTCCAGCGGCAGCTCTGGCGGCATCTCCGGCTGCTCCACCACCTGCCGCTGCAGTGGTGCCGCCACGTGCTGAAGTGAACAATGCTACACCAGAAATGAACTCTATTGATGACCATTCTGGAACTGCAATGTTTGCTCAGTTCAGCAATCTGAATGGCAGGTAA	2670	0.4689	MGKIEKKMKAMTQPFLSPFSSSSLMAILLVITILFSFSSPSLALPPSESFQPRDNFLIDCGADVQSTLPDGRQFKTDPQASSFLNANDEFKINAQDSKLSYPVYKSARIFIQEARYSFHLVQPGFHWVRLHFYPIKNNIFDLQKATFSIFTDAYVLLHSFNVNNTDKPILKEYLINATEPQFTLSFIPLKNSAAFINAIEVVSAPDELISDTATDLFPVGEFSGITAYGLQPVFRVNNGGPLITSSNDTLGRTWESDEPFLTNKNLAKKASVATTAVKFPQHNPAISPLTAPQTVYASVTEMADAGVNQPNFNVSWKFDVDNSFCYLVRLHFCDIVSKGLNQLYFNVYVNGKTAISNFDLSAVTGALSTPYFKDIVVNATLIGEEGLSIQVGPATGVGGSANAIVNGIEVMKMSNSVNSLDGEFGVDGRSISGSNRGTVAAVGFAMMFGAFVGLGAMVVKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKNSMGKSNFFSSSMGLGRYFSLSELQEATKNFDSKNIIGVGGFGNVYLGVIDEGTQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPSGHFRDHLYGKNMPPLSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDENLTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLIGSINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDETKSSAAAPTSPHVPPTPSTPSDDPPAPAAALAASPAAPPPAAAVVPPRAEVNNATPEMNSIDDHSGTAMFAQFSNLNGR*	890

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu11g2189	889	PANTHER	OS07G0166700 PROTEIN	40	834	IPR045272	GO:0004714\|GO:0006468
	Pvu11g2189	889	MobiDBLite	consensus disorder prediction	820	834	-	-
	Pvu11g2189	889	SMART	serkin_6	523	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu11g2189	889	Pfam	Malectin-like domain	58	413	IPR024788	-
	Pvu11g2189	889	ProSiteProfiles	Protein kinase domain profile.	523	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu11g2189	889	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	643	655	IPR008271	GO:0004672\|GO:0006468
	Pvu11g2189	889	Gene3D	Phosphorylase Kinase; domain 1	485	598	-	-
	Pvu11g2189	889	SUPERFAMILY	Protein kinase-like (PK-like)	506	790	IPR011009	-
	Pvu11g2189	889	MobiDBLite	consensus disorder prediction	841	855	-	-
	Pvu11g2189	889	ProSitePatterns	Protein kinases ATP-binding region signature.	529	551	IPR017441	GO:0005524
	Pvu11g2189	889	PANTHER	BNAC03G60370D PROTEIN	40	834	-	-
	Pvu11g2189	889	Gene3D	Transferase(Phosphotransferase) domain 1	599	819	-	-
	Pvu11g2189	889	Gene3D	-	55	205	-	-
	Pvu11g2189	889	Gene3D	-	231	415	-	-
	Pvu11g2189	889	MobiDBLite	consensus disorder prediction	863	889	-	-
	Pvu11g2189	889	CDD	STKc_IRAK	529	793	-	-
	Pvu11g2189	889	Pfam	Protein tyrosine and serine/threonine kinase	526	720	IPR001245	GO:0004672\|GO:0006468
	Pvu11g2189	889	MobiDBLite	consensus disorder prediction	803	889	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu11g2189	Pvu-Chr11	49338660	49341958	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu11g2189	50	889	Receptor kinase-like Gene Family	AT4G39110	68.047	0.0	1188

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pvu11g2189		Malectin_like	2e-35	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu11g2189	-		-	pvu:PHAVU_011G210400g	1654.03