Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2185 ATGGTGAAGGACACTGCCTACTATGACGTGTTAGGTGTCAATTTTGATGCATCTGCTGCAGATATTAAGAAGGCTTATTATGTCAAGGCAAGAATTGTTCACCCTGATAAAAATCCTGGGGATCCTAAGGCTGCAGAAAATTTTCAGAAACTTGGTGAGGCTTACCAGGTTTTAAGTGACCCCGGGAAGCGTGAAGCATATGATAAACATGGAAAGGAGGGATTACCGCAAGATTCAATGATGGACCCTACAGCTGTATTTGGAATGATTTTCGGAAGTGAAGTTTTTGAAGAATATATTGGACAACTTGCACTGGCTTCTTTAGCATCTATAGAGATTGATGAAGACATACAGGATCCTGAAGTTCAGAGGCAAAAAATTCAAGAAAAGATGAAGGCATGGCAGAAGGAAAGGGAGCAGAAGCTTTCAGTAATTCTGAAAGACCGGCTTCAATTATCTGTTGTTGGTCAAGAAGAAGAATTCACTGCATGGGCAAAGTCAGAAGCTCGTAGCCTCTCTAAAGCTGCTTTTGGAGAGGCCATGCTACACACAATTGGTTACATCTACACACGAAAAGCTGCAAGAGAAATTGGAAAGGATTTACGGTACATGAATGTTCCCTTTTTGGCAGAGTGGGTCCGAGATAAAGGACACCGTATTAAGTCACAAGTAACAGCAGCCTCAGGAGCTGTGTCCCTAATTCAAATACAAGAAGAGCTCAAGAAGCTAAACCAAGGAGAAAATAAGGAAGAAAACATAATCAAAGCTATTGAAGATAAGAAGGATGCCATGGTTAATTCTCTATGGCAGATCAATGTGATTGATATTGAATCAACTCTGTCACATGTTTGCCAAGCAGTTCTTAAAGATTCTAGTGCCTCCAGAGATGTTCTGAAGGCTCGGGCCAAAGCATTGAAAAAGTTAGGAACCATCTTTCAAGGTGCTAAGGCTCCTTATAGCAGAGAAAACAGCCTACGGAAAGAAAGTGGCAAACCAGTAGATGGTCCTTCTTCATCATCGTGA 1023 0.4145 MVKDTAYYDVLGVNFDASAADIKKAYYVKARIVHPDKNPGDPKAAENFQKLGEAYQVLSDPGKREAYDKHGKEGLPQDSMMDPTAVFGMIFGSEVFEEYIGQLALASLASIEIDEDIQDPEVQRQKIQEKMKAWQKEREQKLSVILKDRLQLSVVGQEEEFTAWAKSEARSLSKAAFGEAMLHTIGYIYTRKAAREIGKDLRYMNVPFLAEWVRDKGHRIKSQVTAASGAVSLIQIQEELKKLNQGENKEENIIKAIEDKKDAMVNSLWQINVIDIESTLSHVCQAVLKDSSASRDVLKARAKALKKLGTIFQGAKAPYSRENSLRKESGKPVDGPSSSS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2185 340 SUPERFAMILY Chaperone J-domain 2 99 IPR036869 -
Pvu11g2185 340 Gene3D DnaJ domain 1 86 IPR036869 -
Pvu11g2185 340 CDD DnaJ 7 60 IPR001623 -
Pvu11g2185 340 SMART dnaj_3 5 63 IPR001623 -
Pvu11g2185 340 Pfam X-domain of DnaJ-containing 135 322 IPR026894 -
Pvu11g2185 340 MobiDBLite consensus disorder prediction 317 340 - -
Pvu11g2185 340 Coils Coil 240 260 - -
Pvu11g2185 340 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Pvu11g2185 340 PRINTS DnaJ domain signature 8 26 IPR001623 -
Pvu11g2185 340 PRINTS DnaJ domain signature 26 41 IPR001623 -
Pvu11g2185 340 PRINTS DnaJ domain signature 43 63 IPR001623 -
Pvu11g2185 340 PRINTS DnaJ domain signature 63 82 IPR001623 -
Pvu11g2185 340 Pfam DnaJ domain 7 68 IPR001623 -
Pvu11g2185 340 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Pvu11g2185 340 PANTHER BNAA01G05380D PROTEIN 1 328 - -
Pvu11g2185 340 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2185 Pvu-Chr11 49213974 49221634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2185 7 69 Miscellaneous Gene Families AT1G16680 50.769 2.09e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2185 - - gmx:100787075 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2185 11 49213974 49221634 Pvu11g2185 11 49213974 49221634 ECH