Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2170 ATGTCACACTATTCATCTCTTGTTTTTGTTTTACTGTGTCTTTGCAATCTCTATTCTTCAGAAGCTCTCAATGGTGGATTCAGTGTGGAGATGATCCACCGTGACTCACCAAAATCACCATTCTATAACTCCACAGAAACCCAGTTCCAAAGAATTGCCAATGCCCTAAGTCGTTCCATTATCCGTGCGAACCATTTCAACAAATCTTTTGTGTCTGCAAACACACCTCAGGCACCAGTAACCTCAGCTCAAGGAGAATACCTAATCAGTTATTCTGTAGGAACCCCACCACTCCAACTCTTTGGAATCATTGATACTGGTAGTGACCTCACTTGGATGCAATGCCAACCATGTCAAACATGTTTCAAGCAAATCTCTCCCATCTTTGATCCTTCAAAATCCAAAACCTACAAAACCATCGGTTGCTTCACTGATACATGTCGTTCTGTAATAGGTACCTCTTGCCCTACACGCACCAGCAATTGTCTATATACTATTAGATATGGTGATGGCTCATACTCACAAGGAGATCTTAGTTTTGAGACACTTACCCTAGCCTCCACCAGTGGCTCACCTGTCACAATTCCTAGTTTTGGAATAGGATGTGGTCGTAGGAATTATCTTTACTTTCAACATGGAGGTTGTAGCATAGTTGGGCTAGCACGTGCACCAATGTCCTTTGTGAATCAATTGGGTCCATCAATAGGTGGAAAGTTTTCTTACTGTTTGGTGCCAATACGTTCACCACCAAGTGTATCTAGCAAACTCAACTTTGGAAATGCTGCTGTGGTTTCTGGGCGTGGCACTGTTTCAACCCCCATATATTCACGAGCTGGAGAACCATTTTACTACCTAAACCTAGAAGCAATTAGTGTGGGAAGCACTAGAATAGAGCTTGGAGGGTATCCACCAAGAGGTGGAAAGGGAAATATCATAATTGACTCAGGCACAACGCTCATTTCTCTGCTACCTGCTACTTACTCAAAGTTGGAAGCAATGATTGCAAACGATGTTAAGATGACACCTGCTAAGGATCCAACTGAAACGTTGAGCCTTTGTTACAGAGTATTTGATAGACCATATGTGCCAGTGATCACAGCACATTTTACTGGTGGAGATGTCGTTTTATATGATTCCAACACCTTTATTGAAGTGGCGGATCGTATAATCTGCTTGGGATTCCTGAAATCTCATGGTAGAGCTGTCTTTGGGAACTTGGCTCAGCAAAACATGTTGGTTGGTTATGATCTTCAGAAGAACACAGTGTCCTTTAAGCCTGCGGATTGCACAAAGCAGTGA 1299 0.4265 MSHYSSLVFVLLCLCNLYSSEALNGGFSVEMIHRDSPKSPFYNSTETQFQRIANALSRSIIRANHFNKSFVSANTPQAPVTSAQGEYLISYSVGTPPLQLFGIIDTGSDLTWMQCQPCQTCFKQISPIFDPSKSKTYKTIGCFTDTCRSVIGTSCPTRTSNCLYTIRYGDGSYSQGDLSFETLTLASTSGSPVTIPSFGIGCGRRNYLYFQHGGCSIVGLARAPMSFVNQLGPSIGGKFSYCLVPIRSPPSVSSKLNFGNAAVVSGRGTVSTPIYSRAGEPFYYLNLEAISVGSTRIELGGYPPRGGKGNIIIDSGTTLISLLPATYSKLEAMIANDVKMTPAKDPTETLSLCYRVFDRPYVPVITAHFTGGDVVLYDSNTFIEVADRIICLGFLKSHGRAVFGNLAQQNMLVGYDLQKNTVSFKPADCTKQ* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2170 432 PANTHER OS07G0603500 PROTEIN-RELATED 4 430 - -
Pvu11g2170 432 Pfam Xylanase inhibitor N-terminal 87 260 IPR032861 -
Pvu11g2170 432 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 4 430 - -
Pvu11g2170 432 SUPERFAMILY Acid proteases 82 429 IPR021109 -
Pvu11g2170 432 Pfam Xylanase inhibitor C-terminal 283 425 IPR032799 -
Pvu11g2170 432 Gene3D Acid Proteases 259 432 IPR021109 -
Pvu11g2170 432 ProSiteProfiles Peptidase family A1 domain profile. 87 425 IPR033121 -
Pvu11g2170 432 Gene3D Acid Proteases 65 258 IPR021109 -
Pvu11g2170 432 CDD pepsin_A_like_plant 86 429 IPR034161 -
Pvu11g2170 432 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 102 113 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2170 Pvu-Chr11 49109769 49111067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2170 56 431 Miscellaneous Gene Families AT1G44130 26.161 7.74e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2170 - - gmx:100790610 526.939