Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2165 ATGACAACAATGTCACATTCCTCTCTGACTATTCTTTTACTGTGTCTTTGTTACGTCTCTTTCTCAGAGGCTCTCAATGGTGGTTTCACTGTGGAGATCATCCACCGTGACTCACCAAAATCACCACTCTATCGTCCCACACAAACTCAATTCCAACGATTTTCCAATGCTGTTCGAAGCTCCATTCATCGTGCTAACCGTTTCAACCAAAGTTTTCTCTCTTCAAACACAGTTGGATCCACTCTAGCAGCAGACCTAGGTAACTACATCATGAGCTATTCAGTTGGAACCCCAGAATTCAAACTTTTTGGCATTGTTGACACAGGCAGTGACATAATTTGGCTACAGTGTCTACCTTGTAAAATTTGTTACAACCAAACCACTCCAATTTTCAATCCTTCAAAATCCAAGACCTACAAAACCCTTCCTTGTTCTTCTACTTCATGTAAATCAGTGACATACAACACTTGTTCTTCTCCTCAAGGGAAAAGTTGTGAATATAGTATTAGCTATGAGGATGGCACATACTCAGAAGGAGATCTTAGTTTGGAGACACTCAGTTTAGGCTCCACTAATGGCTCTTCTGTGCATTTTCCTGCAACTGTGATAGGATGTGGAAGGAACAATAGTTTTGTCTCTGAAGAGTTAAGTTCTGGCATAGTTGGTTTGGGAAGTGGACCTGTGTCTCTGATATCTCAATTGAGTTCTTCAATAGATGCAAAGTTTTCTTATTGTTTTGCAGCAAAAGATGACAAACCTAGCAAACTCAGTTTTGGAGATGCTGCTGTGGTTTCTGGGAGTGGCACTGTTTCCACCCCAATAGGTTTTCATGATCAAGAGACACATTACTACCTAACACTGGAAGCAATGAGTGTTGGAAACAACAGAATAGAGTTTAGAAACTCTTCATCTGGGTCTACTGGAGAGGGAAATATCATGATTGACTCAGGTACAACACTCAGTCTTGTGCCAGGTTATGTTTACTCAAAGTTGGAATCAGCAGTGGCAGCTGAAGTTAAGTTGAAACGAGCTAAGGATCCATTGAAACAGTTGAGCCTTTGCTATGAAGGTAAATTTGATGAAGTACATGCACCAGTGATAACAGCACATTTTAGAGGTGATGCAGATGTGAAGTTGAGTGTTGAGAACTCCTTTATTGATGCTGGTGATGGGATAGTTTGCTTTGCTTTCTTGGCAAGTGAAACTTTATCCATCTTTGGAAACATTTCTCAGAAAAACCTCTTGGTTGGCTATGATCTGCATAAGAAAACAGTCTCATTTAAGCCCACAGATTGTAGTAAACAGTGA 1308 0.4044 MTTMSHSSLTILLLCLCYVSFSEALNGGFTVEIIHRDSPKSPLYRPTQTQFQRFSNAVRSSIHRANRFNQSFLSSNTVGSTLAADLGNYIMSYSVGTPEFKLFGIVDTGSDIIWLQCLPCKICYNQTTPIFNPSKSKTYKTLPCSSTSCKSVTYNTCSSPQGKSCEYSISYEDGTYSEGDLSLETLSLGSTNGSSVHFPATVIGCGRNNSFVSEELSSGIVGLGSGPVSLISQLSSSIDAKFSYCFAAKDDKPSKLSFGDAAVVSGSGTVSTPIGFHDQETHYYLTLEAMSVGNNRIEFRNSSSGSTGEGNIMIDSGTTLSLVPGYVYSKLESAVAAEVKLKRAKDPLKQLSLCYEGKFDEVHAPVITAHFRGDADVKLSVENSFIDAGDGIVCFAFLASETLSIFGNISQKNLLVGYDLHKKTVSFKPTDCSKQ* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2165 435 Gene3D Acid Proteases 258 435 IPR021109 -
Pvu11g2165 435 PANTHER OS07G0603500 PROTEIN-RELATED 7 433 - -
Pvu11g2165 435 CDD pepsin_A_like_plant 89 432 IPR034161 -
Pvu11g2165 435 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 312 323 IPR001969 GO:0004190|GO:0006508
Pvu11g2165 435 ProSiteProfiles Peptidase family A1 domain profile. 89 428 IPR033121 -
Pvu11g2165 435 Pfam Xylanase inhibitor C-terminal 282 428 IPR032799 -
Pvu11g2165 435 Gene3D Acid Proteases 66 257 IPR021109 -
Pvu11g2165 435 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 7 433 - -
Pvu11g2165 435 SUPERFAMILY Acid proteases 85 433 IPR021109 -
Pvu11g2165 435 Pfam Xylanase inhibitor N-terminal 89 260 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2165 Pvu-Chr11 49026488 49027814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2165 86 434 Miscellaneous Gene Families AT1G77480 28.877 2.96e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2165 - - var:108339078 569.311