Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2143 ATGGGAGTGAAAGATCAAGAGATGGAGAAGGAGAAAGAAGAAACAACCAACCACAACAACAACCTAGACCAAACCAAAAACCAAAACCAAAACCTTAACCTAGACCAAAACAACCACCCTTCTAACTCTCTCCTCCTCCCAATCAAGGAAGAGAGTGGTGTGAGATCAAAGGGTTTTGGAGGTGGTGACAGAGTGAAGAGAGATGAATGGAGTGAAGGAGCAGTGTCAACCCTTCTAGAAGCCTATGAAGCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCATGACTGGGAGGACGTGGCCCGGCGCGTGTCGTCACGCGCCACCAGCACCAAGTCCCCAAAAACCTCCACACAGTGCAAGAACAAGGTGGAGTCCATGAAGAAGAGGTACAGATCAGAATCTGCAACCGCAGAGCATCCCTCTTCATGGCCTCTGTATTCGCGCCTCGATCTTCTTCTCAGGGGAACTGGCCCGCTCCTCTCCTCCCCGCCGCCGCTGCTCACGGTGGCACCCTCGTCGGCAGAACCGCCGCAACCTTCGCCGCCGTCAGAGCCACTTGCGATCGCGCAGAACTCGCATGGATCCAATGGGGTTGATGATAAGCTTGTCAAGGAAGATGTGTTAGCAGCAAAGTCATTTGAGCATGTATCTAGCAAGAATCCATTGGACACAGATAGCAGCACCCCTGCACTTTACAGCAAGAAGGAAGAGATGAGATGTAACAAGAGGAAGAAGAAAGGGATTGAGAACACAGGGAGAAGAAGAAAAGAGTACATGGAGATAGCAGAAAGCTTGAGATGGCTTGCAGAAGCCATGATAAGGTCAGAAGAAGCAAGAATGGAGACAATGAAGGAGATAGAGAGGATGAGAGTTGAAGCTGAGGCCAAGAGAGGGGAAATGGACCTCAAGAGAACTGAAATCATTGCCAACACACAGTTAGAGATTGCTAGAATCTTTGCTAATGTCAACAAAGGTGTTGATTCATCTCTAAGAATTGGGAGAAGTTAA 1017 0.4907 MGVKDQEMEKEKEETTNHNNNLDQTKNQNQNLNLDQNNHPSNSLLLPIKEESGVRSKGFGGGDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARRVSSRATSTKSPKTSTQCKNKVESMKKRYRSESATAEHPSSWPLYSRLDLLLRGTGPLLSSPPPLLTVAPSSAEPPQPSPPSEPLAIAQNSHGSNGVDDKLVKEDVLAAKSFEHVSSKNPLDTDSSTPALYSKKEEMRCNKRKKKGIENTGRRRKEYMEIAESLRWLAEAMIRSEEARMETMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFANVNKGVDSSLRIGRS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2143 338 MobiDBLite consensus disorder prediction 1 19 - -
Pvu11g2143 338 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 52 334 IPR044823 -
Pvu11g2143 338 Coils Coil 5 35 - -
Pvu11g2143 338 MobiDBLite consensus disorder prediction 172 187 - -
Pvu11g2143 338 Gene3D - 70 135 - -
Pvu11g2143 338 MobiDBLite consensus disorder prediction 166 202 - -
Pvu11g2143 338 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 52 334 - -
Pvu11g2143 338 MobiDBLite consensus disorder prediction 1 66 - -
Pvu11g2143 338 MobiDBLite consensus disorder prediction 20 45 - -
Pvu11g2143 338 Pfam Myb/SANT-like DNA-binding domain 67 154 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2143 Pvu-Chr11 48495494 48498438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2143 45 159 Trihelix Transcription Factor Family AT3G14180 37.190 2.48e-16 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu11g2143 Myb_DNA-bind_4 6.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2143 - - gmx:100793978 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2143 11 48495494 48498438 Pvu11g2143 11 48495494 48498438 ECH