Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2115 ATGGAACTAGTCATTGAGGACTTAGAAGATCTTGCAACCCGCAGCCATGTTCTAGGTTTGAAAAGGGCTGATGATGTTGGAGTCAGATCCGGTAGTAAAATATCAACAACATATTTGCCGAACGAAAGTGATATCTATGGCAGAGAAGATGACAAACAATTTGTCTGTAACTGGCTCACATCCGACACTCACAACAACCTATCTATACTTTGTATTGTGGGAATGGGAGGGGTGGGTAAGACCACTCTTGCCCAACATGTATTCAATGACCCAAGGATGGATGAGGCTAAATTTGATGTCAAAGCTTGGGTTTGTGTTTCAGATGAATTTGATGTTTTTAAGGTATCAAGAGCAATTCTTGAGCATGTCACTACATCTACTGATGACAGTAGAGATATAGAGATGGTTCACAGAAGATTGAAAGAAAAATTGACAGGAAAAAAGTTTCTTCTTATTTTGGATGATGTGTGGAACGAAAACCAATTTAAATGGGAAGAAGTGCAAAAGCCACTTGTTTTTGGAGCCCAAGGGAGTAGGATTCTTGTGACTACACGTAGTAAGGAAGTTGCTTCTACCATGCGGTCAGAAGAACACTCCCTAAAGCAATTACAAGAAGATGATTGCTGGAATTTGTTTGCTAAACATGCATTCCGAGATGATGATGCTCCAGCAAATCCAGAGTGCAGGGAAATTGGCATGAAGATTGTAAAAAAATGCAAAGGACTACCTCTTGCCTTGGAAACAATGGGAAGTATGTTATACAACAAATCATCTGTTTCAGAATGGAAAACTGTGTTCCAAAGCGAAGTATGGGAATTTTCAAAAGAGCGTTGTGATATTATTCCCGCTTTAGCATTGAGCTATATCCACCTTCCTTCCCATCTCAAGGTATGCTTTGTTTATTGTGCCCTATTCCCCAAGGATTATAAGTTTAAAAAGGAGGATTTGATTCATTTGTGGATGACTAGAAATTTTGCCCACTATCGTCAACCTAGTAGGACTCCAGAAAAAGTTTGCCAACAATACTTCAATGATCTACTATCAAGGTCCTTCTTCCAACAATCAAAGAAAGAAGTATTTGTCATGCATGACCTTCTACATGATTTGGCAAAATATGTCAGTGGAGGCATATACTTCAGGTCCGAAAATCAAACAGAAAAGATACCAGAAGTAACTCGTCATTTTTCATTTAAACACGGTTACCCCAGATGTTTTGATGGGTTTAGAACTTTATCTAATACAGAAAGGATACGTACATTTATTTCAAATGGTATCAAAATGTCGATACATGAATTGTTGTCCAAGTTTAAGATCATACGTATCTTATCTTTGTCTCATTGTTCTGACCTTCAAGAGTTACCTGACTCTGTTGGAAATCTTGAGCATCTCCGTTCCTTAGACCTCTCCAGTACTAGAATAAAAAGACTAACTGAAAAGATATGTTCACTCTCCCACTTGCAGATACTGAAGTTGAATTACTGTAGAGATTTGGATGAGTTGCCCTCAAATTTGTATTTACTCACCAATTTGTTCCGGCTTGAACTTATAGAGACTAAAGTGAAAAAGGTGTCACCGCATTTGGGAAAACTGAAGAATCTAAAAGTAGTAATGAATTTCTTTAATGTTGGCCATGGCAGGGAGTTTGGTGTGCAACAGCTAGGAGAGCTCAACCTTGAGGGAAGTCTATCAATTGGGGACCTAAAGAATATTTCGAATTCCCTGGATGCATTAGAAGTGGATTTGAAGAATAAAACACATCTTGTGGCGTTGACCTTAGAATGGGGGTGGAATCGGAACTCTATTGATTCAAAAAAAGAAGAGGACGTAATTGAGAATCTACAACCTTCCAAAAACTTAAAGAAGTTGTCAATCATTGGATATGGTGGAAAACGATTTCCAAATTGGTTACATGAAAATTCATTGTCGAATATAGCGTCCTTAATGTTGGATGGATGCGAATTTTGCCAATGTTTACCTCCCCTTGGACTTCTACCATTTCTCAAGGTCTTGAAGATTTCAAGACTTGATGGAATAGTGAGTGTAGATGCTGATTTTCATGGGAACAATTCTTCTTCATTTAAATCCCTTGAAACATTGGACTTCTCCTTTATGAGTCAATGGGAAAAGTGGGAATGCCAAGTTGTGACAGGTGCTTTTCCACGTCTACGAGATCTTTCTATAACAAATTGTCCAAAGCTTAAAAGACAGCTGCCAGAGCAACTTATTCCTTTGGAAACACAAGAAGTTGAAGATTGCCAACAACTTGAGCCTTCTACTCCTAGGATTGTAGAAGAGGTAACACTCAAGTATTGTCTTAAATTTGAATCTCTGAGGAGGTTATGGATAAAAGACTGTCCAAGACTAGTGTCGTTTCCTGAAGGAGGTTTGCCATCAAATCTAGAAAAGCTGACAATAGAAGACTGTTCAAGACTTGAGTCATTGCCTGACGAAGGTTTCCCATCAAATCTCCAGACTTTAACAATAAAAGATTGTCGAAGACTTAAGTCGTTCCCTCACAGAGGTTTCCCATCAAATCTCCACACTCTGACAATACAAGGTTGTTCAGTACTTGAGTCGTTCCCTAACGGAGGTTTCCCATCAAATCTCAAGGTGCTGAGAATCATTAATTGCTCTAGACTTGTTGGCTCATTGAAAGGAGCTTTCACAGACAGTTCTTCTTTGGAAACCTTGTGGATTGCAAAACTAGATGCAGAATGTTTTCCTGATGAAGGTTTGCTTCCCCTCTCTCTTACTTCTCTAACCATCTCTGATTGTCCAAATCTACAAAAACTGAACTACAAGGGTCTCCATCAACTGTCGTCCCTTAAGAATTTGGATCTTAGAAATTGCCTCAACCTCCATCGCTTACCCGAGGAGGGTCTTCCCAAATCAATTTCAAATCTTAATATTCGTGGTTGTCCTCTGCTGGAACCGCGTTGCCGGAAAAGAAGAGGCGAAGATTGGGAAAAGATTGCACACATTCAGAATATATCGCAATGA 3000 0.3913 MELVIEDLEDLATRSHVLGLKRADDVGVRSGSKISTTYLPNESDIYGREDDKQFVCNWLTSDTHNNLSILCIVGMGGVGKTTLAQHVFNDPRMDEAKFDVKAWVCVSDEFDVFKVSRAILEHVTTSTDDSRDIEMVHRRLKEKLTGKKFLLILDDVWNENQFKWEEVQKPLVFGAQGSRILVTTRSKEVASTMRSEEHSLKQLQEDDCWNLFAKHAFRDDDAPANPECREIGMKIVKKCKGLPLALETMGSMLYNKSSVSEWKTVFQSEVWEFSKERCDIIPALALSYIHLPSHLKVCFVYCALFPKDYKFKKEDLIHLWMTRNFAHYRQPSRTPEKVCQQYFNDLLSRSFFQQSKKEVFVMHDLLHDLAKYVSGGIYFRSENQTEKIPEVTRHFSFKHGYPRCFDGFRTLSNTERIRTFISNGIKMSIHELLSKFKIIRILSLSHCSDLQELPDSVGNLEHLRSLDLSSTRIKRLTEKICSLSHLQILKLNYCRDLDELPSNLYLLTNLFRLELIETKVKKVSPHLGKLKNLKVVMNFFNVGHGREFGVQQLGELNLEGSLSIGDLKNISNSLDALEVDLKNKTHLVALTLEWGWNRNSIDSKKEEDVIENLQPSKNLKKLSIIGYGGKRFPNWLHENSLSNIASLMLDGCEFCQCLPPLGLLPFLKVLKISRLDGIVSVDADFHGNNSSSFKSLETLDFSFMSQWEKWECQVVTGAFPRLRDLSITNCPKLKRQLPEQLIPLETQEVEDCQQLEPSTPRIVEEVTLKYCLKFESLRRLWIKDCPRLVSFPEGGLPSNLEKLTIEDCSRLESLPDEGFPSNLQTLTIKDCRRLKSFPHRGFPSNLHTLTIQGCSVLESFPNGGFPSNLKVLRIINCSRLVGSLKGAFTDSSSLETLWIAKLDAECFPDEGLLPLSLTSLTISDCPNLQKLNYKGLHQLSSLKNLDLRNCLNLHRLPEEGLPKSISNLNIRGCPLLEPRCRKRRGEDWEKIAHIQNISQ* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2115 999 SUPERFAMILY L domain-like 773 992 - -
Pvu11g2115 999 PANTHER OS05G0414200 PROTEIN 1 794 - -
Pvu11g2115 999 SUPERFAMILY L domain-like 361 755 - -
Pvu11g2115 999 PRINTS Disease resistance protein signature 69 84 - -
Pvu11g2115 999 PRINTS Disease resistance protein signature 143 157 - -
Pvu11g2115 999 PRINTS Disease resistance protein signature 239 253 - -
Pvu11g2115 999 PRINTS Disease resistance protein signature 458 474 - -
Pvu11g2115 999 CDD AAA 46 156 - -
Pvu11g2115 999 Gene3D Ribonuclease Inhibitor 408 786 IPR032675 -
Pvu11g2115 999 Gene3D - 29 201 IPR027417 -
Pvu11g2115 999 Gene3D Ribonuclease Inhibitor 798 995 IPR032675 -
Pvu11g2115 999 Gene3D - 202 286 IPR042197 -
Pvu11g2115 999 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 302 IPR027417 -
Pvu11g2115 999 Gene3D - 287 372 IPR036388 -
Pvu11g2115 999 Pfam NB-ARC domain 49 267 IPR002182 GO:0043531
Pvu11g2115 999 PANTHER DISEASE RESISTANCE PROTEIN RP 1 794 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2115 Pvu-Chr11 48152413 48155957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2115 799 975 WRKY Transcription Factor Family AT5G45050 28.090 6.72e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2115 - - pvu:PHAVU_011G202600g 1301.58