Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2112 ATGGCTGAGCAACCAATGATGAGTGATGTTGCTTCTTCCTCAAACTCTTCTTCTATGGCATCTTGTAAAAAATATGATGTTTTTCTAAGCTTTGGAGGTGAGGACACTCGCATGAACTTCACCAGCCATCTTCATGAGGCTTTGAAGCAAAAAAAAAGCCTGGTTGGAATTGAAGAAAATTATGAAGAAATTGGATCATTACTAAGACCACCCTTGCTACTGCTCTGTATGCACAACTTTCTTCTGAGTTCGAAGGTGGTTGCTTCCTCACAAATGTAA 279 0.3978 MAEQPMMSDVASSSNSSSMASCKKYDVFLSFGGEDTRMNFTSHLHEALKQKKSLVGIEENYEEIGSLLRPPLLLLCMHNFLLSSKVVASSQM* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2112 92 Gene3D - 21 74 IPR035897 -
Pvu11g2112 92 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 70 IPR035897 -
Pvu11g2112 92 Pfam TIR domain 24 53 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2112 Pvu-Chr11 48106871 48107629 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2112 - - pvu:PHAVU_011G202800g 174.096