Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2018 ATGGCTCCTGAGTACGCTATGCAAGGATTGTTTTCAGTGAAATCAGATGTTTTCAGCTTTGGAGTTCGAGTTCTACAAACCATTTGTGGAAGAAAGAACAACGGATTCTATCTGTCAGAACATGGTCAAACTCTTCTTTTATATGCTTGGAGAACATGGTGTGAGGGAAAATGTTTGGAATTGATGGATCCAATGCTGGGGAAATGCTTCAAAGCCAGTGAAGTTGAGAAGTGCATACACATTGCTTTGTTACTAACCATGTCAGATGTTGTTGTTATGCTAGGGAGTGACAACATAACGCTTCCAAAACCCAAGCACCCAACATTTTCAGTTGGAAGAAAG 342 0.4064 MAPEYAMQGLFSVKSDVFSFGVRVLQTICGRKNNGFYLSEHGQTLLLYAWRTWCEGKCLELMDPMLGKCFKASEVEKCIHIALLLTMSDVVVMLGSDNITLPKPKHPTFSVGRK 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2018 114 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 1 113 - -
Pvu11g2018 114 SUPERFAMILY Protein kinase-like (PK-like) 1 89 IPR011009 -
Pvu11g2018 114 Gene3D Transferase(Phosphotransferase) domain 1 1 100 - -
Pvu11g2018 114 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2018 Pvu-Chr11 47035109 47035573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g2018 1 109 Receptor kinase-like Gene Family AT4G23140 50.000 3.81e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g2018 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g2018 - - pvu:PHAVU_011G193900g 239.195