Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1929 ATGGCACCAAAACCAGTTTACCTTTCTCATTTACTCCTTTTAGTCTTGTTTCTTGCCACCATCCAACTTTCAGAGCAGTTAGAGTTTTCTCAGTCTCAAACACTTCTCAAGGTTCAGCAACTTCTTGGCTATCCATCAGCATTAAGTACCCTCAGCAGCACCACAGACTTTTGTAATATTGAACCTACCCAATATTTGACAATAGTCTGCTATGAGGATAGCTTGACACAGCTGCATGTTGTTGGCAACAATGAGTATGCTCCATTGCCTCCAAACTTCTCCTCAGATACTCTGTTTGCTACACTAGGCACTCTATCAAGCTTGAAAGTCCTCTCTCTGGTTTCTCTTGGACTCTGGGGGCCCTTACCTGAAAGCATTGCACAGTTGTCTTCATTGGAAATACTTAACATTAGCTCAAACCACTTCAATGGAGCCATTCCATCTCAACTTTCACTTCTCAGGAACCTGCAGTCAGTGGTACTTGATGATAACAGCTTCAGTGCTGAAATTCCTAGCTGGGTTGGCTCACTTCAAGGTTTGGCTGTCCTTAGTATGAAGAAAAACTGGCTTAGTGGGAGCCTTCCAACTTCATTGGATGCTCTTCAGACCCTGAGGGTATTGGATCTATCAAGTAATCAGTTATCTGGGGAAGTTCCTCATCTCAAGAATTTGGCAAATCTTCAAGTTCTTAACTTGGAAAACAACACATTTGGACCTCATTTTCCTTCACTCCCCACCAAGTTAGTTTCTCTTGTGCTCAGAAATAATAGCTTCAAGCTAAGTGTCCCCTCTGGTTTAAGTTCTTCTTATCTGCTTCAAAGGCTGGACCTTTCATTGAATGGCTTTGTGGGGCCATTTCCATCATCCTTATTGTCACTTCCTTCCATAAATTATCTTGATATTTCCTCAAATAAATTCACTGGAATGCTTTTCAATAACATGTCATGCAATGATGATCTCCACTTTGTAAATTTGTCTTCAAATCTTCTCAAAGGGGAAATTCCCGCTTGTTTGGAACCAAAGACCAGGGTTGTTCTGTATGCTAGAAACTGCTTATCAACTAAGAACCAAGATCAGCACCCTTCAGATTTCTGCAGCAATGAGGCTTTGGCAGTGAAAATCATACCCCGTCAACCAAAGCACAAGAGAACAACTGGTAAAACAGTAATTGTATCAAGTATGGGAGGTGTTGTTGGTGTAGTGCTGATTCTAGGAGTAGTTATCTTGGTTGTTAGCCGAGTTCATAAGAAACAAGTAGTGAAAATACCTTCACAGTCCCCTTTGGAAAATGTCACCAGCCAGTTACATAATGAAGATGAAGTGAAAACTACTACAAGGTCCATAATGGAGCACATCATCAGAAGGGTTCCTGACAAACTTGCTGTGGAAGCACTTACAAGATCCATAAAGGAGCATGTAATGTGCCGAGTGAAAAATAAGCGTGTTGTAAGGGCATCGACAAGGTCCATAATTGAACATGTATCATCAGTTAACACAGCAAAACTACTCACAGATGCAAGGTGTATATCACAAACAATGAAGATGGGAGCCAGCCTTCCTGCTTATAGGACCTTTGCTTTGGATGAACTTAAGGAATCTACAAATAATTTTGATGCATCAAGTTTCATAAGTGAAGGCCCACATGGTCAGATTTATAAAGGGGTTCTCTCTGATGGGATGCACATTGCTATTAGAGGTTTGAAAATGAGAAAGAGACATGGCCCTCAAACTTACATGCACCATGTTGAGATGATTTCAAAGCTAAGGCATTCACACTTGGTTAGTGCCCTTGGGCATGCTTTTGAGTGCAACCAGGACGATTCATGTGTGAACCGTGTATTTCTCATATTTGAGTTTGTTTCAACTAGAAGTTTAAGAACCTGCGTTTCTGGATCTTCTGGGGAAAAGATTTCTTGGATTCAGAGAATAGCAGCTACCATTGGAGTGGTGAAAGGCATTCAATTTTTGCACACAGGGATAGTACCTGGACTATATTCAAATAATCTCAGGATTACAGATATTTTTTTGGACAACAGTAACAATGTTAAAATAAGCAGCTACAATCTGCCACTTTCTGCTGAAAATAAAAGAATGATCAGCAGTGGAACTTCCCCTGGACTCAAAGGAAATATCCAAGCAAGGATAAAGGGTGAAGACAAGAATGATGTCTATGATATTGGGGTAATCTTGCTAGAAATCATTCTGGGCCGACCAATAATGTTCCACAATGAAGTTGGAACACTAAAAGATCTTTTACATGTAAGCATCAAAACTGATGACATAGCTAGAAGAAGTATTGTTGACCCAGCAGTTCACAAGGAATGCTCAGATGAATCATTAATGACAATGATGGAGATATGTGTAAGGTGTCTCTCTGATGACCAAACTGAAAGGCCTTCTGTTGAAGATATTCTCTGGAACTTGCACTTTGCAGCACAAGTTCAGAATTCATGGAAAAGAGACTCAAGTGATCACAGTTACTCTCCTGCACCATCCTCCAGGGACATATAG 2511 0.4062 MAPKPVYLSHLLLLVLFLATIQLSEQLEFSQSQTLLKVQQLLGYPSALSTLSSTTDFCNIEPTQYLTIVCYEDSLTQLHVVGNNEYAPLPPNFSSDTLFATLGTLSSLKVLSLVSLGLWGPLPESIAQLSSLEILNISSNHFNGAIPSQLSLLRNLQSVVLDDNSFSAEIPSWVGSLQGLAVLSMKKNWLSGSLPTSLDALQTLRVLDLSSNQLSGEVPHLKNLANLQVLNLENNTFGPHFPSLPTKLVSLVLRNNSFKLSVPSGLSSSYLLQRLDLSLNGFVGPFPSSLLSLPSINYLDISSNKFTGMLFNNMSCNDDLHFVNLSSNLLKGEIPACLEPKTRVVLYARNCLSTKNQDQHPSDFCSNEALAVKIIPRQPKHKRTTGKTVIVSSMGGVVGVVLILGVVILVVSRVHKKQVVKIPSQSPLENVTSQLHNEDEVKTTTRSIMEHIIRRVPDKLAVEALTRSIKEHVMCRVKNKRVVRASTRSIIEHVSSVNTAKLLTDARCISQTMKMGASLPAYRTFALDELKESTNNFDASSFISEGPHGQIYKGVLSDGMHIAIRGLKMRKRHGPQTYMHHVEMISKLRHSHLVSALGHAFECNQDDSCVNRVFLIFEFVSTRSLRTCVSGSSGEKISWIQRIAATIGVVKGIQFLHTGIVPGLYSNNLRITDIFLDNSNNVKISSYNLPLSAENKRMISSGTSPGLKGNIQARIKGEDKNDVYDIGVILLEIILGRPIMFHNEVGTLKDLLHVSIKTDDIARRSIVDPAVHKECSDESLMTMMEICVRCLSDDQTERPSVEDILWNLHFAAQVQNSWKRDSSDHSYSPAPSSRDI* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1929 836 Gene3D Ribonuclease Inhibitor 30 152 IPR032675 -
Pvu11g1929 836 ProSiteProfiles Leucine-rich repeat profile. 203 225 IPR001611 GO:0005515
Pvu11g1929 836 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 477 826 - -
Pvu11g1929 836 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 424 - -
Pvu11g1929 836 SUPERFAMILY L domain-like 42 354 - -
Pvu11g1929 836 Gene3D Ribonuclease Inhibitor 153 242 IPR032675 -
Pvu11g1929 836 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
Pvu11g1929 836 Pfam Protein kinase domain 542 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1929 836 Gene3D Transferase(Phosphotransferase) domain 1 621 829 - -
Pvu11g1929 836 Gene3D Phosphorylase Kinase; domain 1 497 619 - -
Pvu11g1929 836 ProSiteProfiles Protein kinase domain profile. 537 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1929 836 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 10 424 - -
Pvu11g1929 836 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 477 826 - -
Pvu11g1929 836 SUPERFAMILY Protein kinase-like (PK-like) 517 810 IPR011009 -
Pvu11g1929 836 Gene3D Ribonuclease Inhibitor 243 357 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1929 Pvu-Chr11 46222024 46227927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1929 44 833 Miscellaneous Gene Families AT3G03770 49.937 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pvu11g1929 Pkinase 2.9e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1929 - - gmx:100797327 1374.76