Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1873 ATGGCGAAAAAGGCAGTGTTGATCGGAATCAACTACCCGGGCACCAAGGCGGAGCTCAAAGGTTGCATCAACGACGTGTGGCGGATGCACCGGTGCCTCGTCGACCGTTACGGCTTCTCCGAAGACAACATCACCGTTTTGATCGACACGGACAAATCGTACAGGGAGCCGACGGGGAAGAACATCCGGTCGGCGTTGACCTCACTGGTCCGATCGGCGGAGGACGGAGACGTGCTGTTCGTGCACTACAGCGGACACGGCACGCGCCTTCCTGCGGAAACGGGAGAGGATGATGACACTGGATATGATGAGTGCATTGTTCCTTCTGATATGAATCTCATCACTGATGATGATTTCAAGGAGTTTGTGGATGGGATCCCTAGAGGTTGCAGGATCACAATTGTGTCTGATTCTTGCCACAGTGGTGGCCTACTTGAAGAAGCTAAGGAGCAGATCGGAGAGAGTACAAAGGGAGAGGAAGAACAGTCTGGCTCTGGCTTTGGATTTTCAAACTTTCTGCATCGGAAGGTGGAAGATGCCATTGAGTCTCGCGGATTCCATATCCCTTCAGGTTTGCGCCACCACAGAGGCAGGGATGATGATGATGAGGCTGAAGATAGAGATATTGATCTTCCACATGGGAACTATGGCTATGTGAAGAATAGATCTTTGCCCCTTTCAACCCTCATTGACATACTCAAGCAGAAAACTGGGAAAGATGATATTGATGTTGGGAAACTCAGACCTACCCTTTTCGATGTCTTTGGGGAAGATTCTAGTCCTAAAGTGAAGTTCATGAATGTTATTTTGAATAAACTCCAACAAGGAAGTGGTGAAGGTGGGGGTGGAATATTGGGGTTGGTGGGTGGTCTTGCCCAAGAGTTTCTCAAGCATAAGATTGATGAGAATGATGAGGGATATGCAAAGCCTGCACTGGAGACACGTGTGGAAAGTAAGCAGGAGGCATATGCTGGATCATCCAAACACAGCCTTCCGGCTGGTGGGATTCTGATGAGTGGATGTCAGAGTGACCAAACTTCTGCAGATGCAAGTCCTCCAGGAAACGCTGCCAATGCTTATGGAGCTTTTAGCAATGCAATACAGGCAATAATTGAGGAGAGTAATGGTTCAATCACAAACCACGAACTTGTTCAGAAAGCACGAGAGAAGCTCAAGAAGGAGGGTTTCACTCAGAAACCTGGACTCTACTGCAGTGATCACCATGTTGATGCTCCTTTTGTGTGTTGA 1248 0.4864 MAKKAVLIGINYPGTKAELKGCINDVWRMHRCLVDRYGFSEDNITVLIDTDKSYREPTGKNIRSALTSLVRSAEDGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFKEFVDGIPRGCRITIVSDSCHSGGLLEEAKEQIGESTKGEEEQSGSGFGFSNFLHRKVEDAIESRGFHIPSGLRHHRGRDDDDEAEDRDIDLPHGNYGYVKNRSLPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDSSPKVKFMNVILNKLQQGSGEGGGGILGLVGGLAQEFLKHKIDENDEGYAKPALETRVESKQEAYAGSSKHSLPAGGILMSGCQSDQTSADASPPGNAANAYGAFSNAIQAIIEESNGSITNHELVQKAREKLKKEGFTQKPGLYCSDHHVDAPFVC* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1873 415 Pfam Caspase domain 3 408 - -
Pvu11g1873 415 Gene3D - 1 176 - -
Pvu11g1873 415 Gene3D - 301 414 - -
Pvu11g1873 415 PANTHER METACASPASE-5 1 415 - -
Pvu11g1873 415 SUPERFAMILY Caspase-like 6 121 IPR029030 -
Pvu11g1873 415 MobiDBLite consensus disorder prediction 188 208 - -
Pvu11g1873 415 PANTHER METACASPASE-4 1 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1873 Pvu-Chr11 45594182 45597318 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1873 - - gmx:100802658 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0478 5 4989199 4991987 Pvu11g1873 11 45594182 45597318 PCT