Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1872 ATGGCCAAAAAGGCAGTGTTGATCGGAATCAACTACCCGGGTACCAAGGCGGAGCTCAAAGGTTGCATCAACGACGTGTGGCGAATGCACCGGTGCCTCGTCGACCGTTACGGCTTCTCCAAAGACGACATCACCGTTATGATCGACACGGACAAATCGTACAAGGAGCCCACGGGGAAGAACATCCGGTCGGCGTTGACCTCACTGATTCGATCGGCGGAGGCCGGAGACGTGCTGTTCGTGCACTACAGCGGACACGGCACGCGCCTTCCTGCGGAAACGGGAGAGGATGATGACACTGGATATGATGAATGCATTGTTCCTTCTGATATGAACCTCATCACTGATGATGATTTCAGGGAATTTGTTGACGGGGTCCCTAGTGGTTGTAAGCTCACAATAGTATCAGATTCTTGCCATAGTGGTGGCCTAATTGACGGAGCTAAGGAGCAGATAGGAAATAGTACAAAGGGAGAAGGGCAGCATTCTGGTTCTGGCTTTGGTTTGTCCAGTTTTCTACGTCGTACTGTGGAGGATGCCATTGAGTCTCGCGGAATTCATATTCCTTCATCATTGCGCCATCATAGACACAAGCATGACGACGAAGCTGATGATAGGGACATTGAACTTCCACATGAGCAGTATGGCCATGTAAAGAATAGGTCATTGCCACTTTCTACTGTCATAGAGATACTCAAGCAGAAAACTGGAAAAAATGATATCGATGTTGGCAAATTCAGACTTTCACTTTATGATATTTTTGGGGAAGATGCTAGCCCTAAAGTAAAGAAGTTCATGAAGGTTATCTTGAACAAACTCCAACACGGGGATGGTGGAAGTGACAAGCACGGTGGAATCTTGGGGTTGGTGGGCAGTCTCGCCCAAGAGTTTCTCAAGCAAAAGCTGGATGCAAACGATAATGGATATGCAAAACCTGCCATGGAAACAAAGGTAGACAGTAAATACGAAGCATATGCTGGATCAACAAAGCCTCGTTTTCCAGACGGAGCAATTCTGTTGAGCGGTTGTCAGACTGATCAGACCTCTGCAGATGCAAGCCCTTCTGGTAATGCTGCCAATGCTTATGGAGCTTTCAGCAATGCAATACAGGCTATAATTAAGGAGAGTCGTGGTGCAGTCACAAATCAAGAACTTGTATTGAAGGCAAGGGATAAGCTGAAGAGAGGAGGTTTCAGCCAACGACCAGGACTCTATTGCAGTGATCACCATGTTGAAGGTTCTTTTGTGTGCTGA 1254 0.4737 MAKKAVLIGINYPGTKAELKGCINDVWRMHRCLVDRYGFSKDDITVMIDTDKSYKEPTGKNIRSALTSLIRSAEAGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFREFVDGVPSGCKLTIVSDSCHSGGLIDGAKEQIGNSTKGEGQHSGSGFGLSSFLRRTVEDAIESRGIHIPSSLRHHRHKHDDEADDRDIELPHEQYGHVKNRSLPLSTVIEILKQKTGKNDIDVGKFRLSLYDIFGEDASPKVKKFMKVILNKLQHGDGGSDKHGGILGLVGSLAQEFLKQKLDANDNGYAKPAMETKVDSKYEAYAGSTKPRFPDGAILLSGCQTDQTSADASPSGNAANAYGAFSNAIQAIIKESRGAVTNQELVLKARDKLKRGGFSQRPGLYCSDHHVEGSFVC* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1872 417 Pfam Caspase domain 3 408 - -
Pvu11g1872 417 SUPERFAMILY Caspase-like 6 135 IPR029030 -
Pvu11g1872 417 MobiDBLite consensus disorder prediction 184 203 - -
Pvu11g1872 417 Gene3D - 304 414 - -
Pvu11g1872 417 Gene3D - 1 178 - -
Pvu11g1872 417 PANTHER METACASPASE-5 1 417 - -
Pvu11g1872 417 PANTHER METACASPASE-4 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1872 Pvu-Chr11 45585875 45588451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1872 - - gmx:100527809 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1872 11 45585875 45588451 Pvu11g1872 11 45585875 45588451 ECH