Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1815 ATGGCTGGGTTTGGTGCCGCTGCTACCACCACCCGTGATCACAGACCATTGGGACACACTTCCAAAGAAGGTGAAGTATTTGATGCATCACAGTATGCATTCTTTGGTAAAAATGTTGCTGAGGAAGTTGAGTTGGGGGGGTTAGAAGATCAGGATGAGTATAAGGCCATGCTTGCTGTGGAGTTCAACGAGGAAGATTTATTTCTCAATAAAGAAGAGGCAGAGGATATAAGATCACTTTCTGATATTGATGATCTCACCACCACTTTTTTAAAGTTGAACAAGGTTGTTACTGGACCAAGAAGCCCAGGAGTTATTGGTGAACGGGGATCAAGAGAAAATTCCTCTGCTTCTGAATGGTCACAAAGGGATGACATTCCCTACTGGTTTGATCAGCATAGCTATGACAGTGAAGGGCAAGGATCTCAGGATGGCAATAGATGGTCATCACACCCCCATTCTTCTGTAGCTCAGCTACATGACTCAAAGCCCTTGTACAGAACATCTTCATATCCTGAGCAGCAGCGACAGCTGCAACACCAACTCCAACATTGCTCTAGTGAACCTGTTCCTAACTGGTTTGATCAGCATTTTTATGATAGTGAAAATACTGAGGATGGAAACCGATGGTCATCACATCCACATTCCTCCACTGCCCAATTACAAGAATCAAAGACCTTGTATAGAACATCTTCTTATCCTGACAAGAGACAGGAACTTACTCGGTTTTCTAGTGAACCTATTTTGGCACCAAAATCTTCATTTACTTCGTATCCTCCACCTGGTGGTAGGTCCCAACAGTCTTCCCCAAATCACAGTACAGGTCACTTGAACATTCCTTTTCATGCTGGTGGAGCTCATGTGGCTTTGCCGTCACAAAATCGTTCTCATTATTTCAATTCTGCACTACAGTTGAGTGGATCAAAACATGAGTCACATTTTAGTGGAAATGTGCGGCCATTTACAACTGGCTCCCCACTAAATTATCGAATGCAGAATCCCTGGGTCAACCAATCTGGGTTGTATTCTGGAGATCATCCAAACCTCAGTAGTATGTTGCAGCAACAATTACACCATCAGAGTGGATCATTATCACCTCATCTATTGACCCAATTGCAGCAGCAACAGCAGCATAGACTGCTTCATCCCATTCAGAAATCAGGACGCTACATGTCAGGTTTCCAATCCCATTTATTTAACCCTCAGCTTTGTTCTGGATCATCCATGGTTAGCAAATATGATCATATGCTTGGTCTTGCTGATACCAGAGAACACAGGCCAAAGTCAACAAATAAGGGTAAACAGAGTCATCGTTTTTTGCAACAAGGTTCTGATGCCAGTAGCCAGAAGAATGAAAGTGGTTCAGTACAGTTTAGGTCCAAGTATATGACTAGTGATGAAATTGAGAGTATTCTTAGAATGCAGCAAGCTGTGACTCATTGCAATGATCCCTATCTTGATGACTATTATCACCAAGCTTGTCTTGCTAAAAAAGCTGGGGCTAAGTTGAAACATTCATTTAGCCCAACACAAATAAAGGAACTTCCTCCACGAGCCCGTGCCAATCTGGACTCCCATGGTTTTCTTCAGGTTGATACTTTAGGGAGGGTTTCATTCCTGTCTATTCGTCGACCTCAGGCTCTTCTTGAAGTTGAATCATCAAACTCTTCAACTAGTGGTAGTTCTGAACGTAATATTTCAGAGAAGCCCCTTGAACAGGAGCCTCTGTTTGCAGCCAGAGTCACAATTGAGGATGGTCTTTGTCTTCTTCTTGATGTAGAGGATATTGATCGTTTTCTACAGTGTAATCAACTACAAGATGGTGGGGCTCAATTAAGACGAAGACGGAAGGTCCTTTTGGAAGGACTAGCAACATCTCTCCAACTTGTTGATCCACTGGGAAAGAATGGAAACAAAGTTGGGCTTGGTGCTAAGGATGATGTTGTTTTCTTACGATTAGTATCTATACCCAAAGGTCGTAAACTCATTTCAAAGTATCTTCAGCTACTTGTTTCTGGTAGTGAGCTTATGCGGATAGTCTGCATGACCATCTTTCGTCATTTGAGATTTTTATTTGGTAGTCTACCATCTGAACCTGAAGCTGCCATGACTACAAGTGACCTTTCTAAGATTGTTTGTAAGTGTGTTCAGGGAATGGATCTTGGTGCCCTAGGTGCTTGTCTTGCAGCTGTGGTTTGTTCCTCAGAGCAACCTCCTCTACGTCCCCTTGGAAGCACAGCTGGAGATGGTGCCTCCCTCATTTTAGTATCTGTTCTTGAGAGGGCCACTGAACTTCTTACAGATCCCCATGGTGGTTGCAGCTATATAGCCAATCGTTCATTTTGGCAGGCCTCATTTGACGAATTTTTTGGCCTTCTCACAATGTATTGCATGAATAAGTACCAGAGTATCATGCAATCACTGCTTGTACAAGGGACGCCAAATGTGTCTGTAATTGGATCAGATGCTGCTAAAGCAATTAGTAGGGAAATGCCTGTTGAACTCTTAAGGGTAAGTCTTCCTCACACCAATGACCACCAGAGGAAATTGTTACTAGATTTTGCTCAGCGCTCGGTGCCTGTGGTTGGATTTAACAATTATACCGGGAGCAGTGGTGGTCATGTTAACTCAGAGACTGTGCTAAGTTGA 2649 0.4319 MAGFGAAATTTRDHRPLGHTSKEGEVFDASQYAFFGKNVAEEVELGGLEDQDEYKAMLAVEFNEEDLFLNKEEAEDIRSLSDIDDLTTTFLKLNKVVTGPRSPGVIGERGSRENSSASEWSQRDDIPYWFDQHSYDSEGQGSQDGNRWSSHPHSSVAQLHDSKPLYRTSSYPEQQRQLQHQLQHCSSEPVPNWFDQHFYDSENTEDGNRWSSHPHSSTAQLQESKTLYRTSSYPDKRQELTRFSSEPILAPKSSFTSYPPPGGRSQQSSPNHSTGHLNIPFHAGGAHVALPSQNRSHYFNSALQLSGSKHESHFSGNVRPFTTGSPLNYRMQNPWVNQSGLYSGDHPNLSSMLQQQLHHQSGSLSPHLLTQLQQQQQHRLLHPIQKSGRYMSGFQSHLFNPQLCSGSSMVSKYDHMLGLADTREHRPKSTNKGKQSHRFLQQGSDASSQKNESGSVQFRSKYMTSDEIESILRMQQAVTHCNDPYLDDYYHQACLAKKAGAKLKHSFSPTQIKELPPRARANLDSHGFLQVDTLGRVSFLSIRRPQALLEVESSNSSTSGSSERNISEKPLEQEPLFAARVTIEDGLCLLLDVEDIDRFLQCNQLQDGGAQLRRRRKVLLEGLATSLQLVDPLGKNGNKVGLGAKDDVVFLRLVSIPKGRKLISKYLQLLVSGSELMRIVCMTIFRHLRFLFGSLPSEPEAAMTTSDLSKIVCKCVQGMDLGALGACLAAVVCSSEQPPLRPLGSTAGDGASLILVSVLERATELLTDPHGGCSYIANRSFWQASFDEFFGLLTMYCMNKYQSIMQSLLVQGTPNVSVIGSDAAKAISREMPVELLRVSLPHTNDHQRKLLLDFAQRSVPVVGFNNYTGSSGGHVNSETVLS* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1815 882 MobiDBLite consensus disorder prediction 101 120 - -
Pvu11g1815 882 MobiDBLite consensus disorder prediction 421 457 - -
Pvu11g1815 882 MobiDBLite consensus disorder prediction 210 229 - -
Pvu11g1815 882 MobiDBLite consensus disorder prediction 135 158 - -
Pvu11g1815 882 MobiDBLite consensus disorder prediction 247 276 - -
Pvu11g1815 882 PANTHER PROTEIN PAT1 HOMOLOG 191 861 - -
Pvu11g1815 882 PANTHER PROTEIN PAT1 HOMOLOG 8 190 - -
Pvu11g1815 882 MobiDBLite consensus disorder prediction 131 158 - -
Pvu11g1815 882 MobiDBLite consensus disorder prediction 1 22 - -
Pvu11g1815 882 MobiDBLite consensus disorder prediction 434 457 - -
Pvu11g1815 882 MobiDBLite consensus disorder prediction 196 282 - -
Pvu11g1815 882 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 191 861 IPR039900 GO:0000290
Pvu11g1815 882 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 8 190 IPR039900 GO:0000290
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1815 Pvu-Chr11 44928234 44937583 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1815 K12617 - gmx:100779096 1441.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1815 11 44928234 44937583 Pvu11g1815 11 44928234 44937583 ECH
Pvu5g0586 5 7486032 7495048 Pvu11g1815 11 44928234 44937583 PCT