Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1792 ATGAAGCAGCTAATTCGCAAGCTCTCACGCGTCGGCGACTCCTCGCAGTACACGCTCCTCCGCTCCGACTCCCGCCGCCCGCGACGCGCCGCCTCTCTCCGCCGCCACGCGGGGGTTCCGGTGGGCCACGTGCCGGTGTACGTGGGCGAGGAGATGGAGCGGTTCGTGGTGAGCGCGGAGCTCCTGAACCACCCCGTTTTCGTCAAGCTCCTGAACCGGTCCGCGCAGGAATACGGGTACGAGCAGAAGGGCGTGCTCCGAATCCCCTGCCACGTCATCGTCTTCCAGCGAGTCCTGGAAGCGCTCCGACTCGGTCGCAACTCGCTCCAAGACCTCCACGACCTTCTCACCTCTTCCCAAGAATTTTCCTAG 372 0.6478 MKQLIRKLSRVGDSSQYTLLRSDSRRPRRAASLRRHAGVPVGHVPVYVGEEMERFVVSAELLNHPVFVKLLNRSAQEYGYEQKGVLRIPCHVIVFQRVLEALRLGRNSLQDLHDLLTSSQEFS* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1792 123 Pfam Auxin responsive protein 24 102 IPR003676 GO:0009733
Pvu11g1792 123 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 119 - -
Pvu11g1792 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1792 Pvu-Chr11 44465565 44466394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1792 39 113 Calmodulin-binding Proteins AT5G20810 41.333 6.43e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1792 K14488 - jre:109001765 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1792 11 44465565 44466394 Pvu11g1792 11 44465565 44466394 ECH
Pvu5g0622 5 8332463 8333547 Pvu11g1792 11 44465565 44466394 PCT