Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1725 ATGGTGAGATTCAACTTGGTCATGCTTTGCTTATCTGTGTTGTTATGTGTTGTTAATGCATTGAACACTGATGGGGTGACTCTTCTGTCACTCCAGAAGCATTGGACATTTGTTCCTCCTTCCATAAACTTGAGTTGGAATGCTTCTGATTCCACTCCATGCTCTTGGTTAGGAGTCCAGTGTGACAATAACTATAATGCAATCTCTCTTAATCTCTCTGAACACTCAATTTCAGGTCTTTTGGGACCTGAAATAGGACACTTGAGTCATTTGCAAACACTTGACTTGGCCTCAAACAACTTCTCAGGGAAAATACCTCCTGAGTTAGGAAATTGTAGTCTGCTTCAGAACCTGGACCTTTCTTATAACAGTATCACAGGAAACATACCTGATAGTTTGAGAAACTTGCATAACTTAGTCTCTTTCAGTGTTAGGTACAATATGCTAACTGGTCAAATTCCTGAGTTCTTGTTTCAACTTCAACACTTGGAAGATCTTTTCCTGAACCGAAACTCTTTGACTGGTTCCATTCCAATGAATGTTGGGAACGGTACACAAATTTTGATGTTGTATCTGGATGGTAATCAGTTGTCAGGAGGGATTCCCCCCTCCATTGGAAACTGCAGTAAATTAGTGGAGCTATATTTGGATTATAACCAGTTGCATAGAGTTCTACCTGAAAGTCTTAACAATCTCCATAGTGTTGTTAGGTTAAGTCTTAGTAATAATAGACTTGAGGGTACCATTCCATTATTTGGTTCTAGCATATGTAAAAGTTTACAGTATTTGGACCTGAGGCACATCCCATCATCCTTGGGACAACTAAGAGAACTTTCTATTCTTCGCATTGAAAACAATCATTTGTCAGGACAGATACCTTCAGAAATTGGTAATTGTAGGTCATTACAACAGTTGATGTTAAATAACAATGAATTTGAGGGAGAGATTCCAAGTGAATTTGGAAAGCTAAGTCAATTGCAAGATCTCAGACTTCATGTCAACCATTTGACAGGTGGAATTCCAGAACTGCATGTGTATTACAATAACCTTTCTGGGGAGGAGCCTTCAGAATTGGCAGAACTCAAACAACTGAAAAATCTCACCTTGTATCACAATCAATTCTCTGGAGTCATTCCTCAAAGCTTAGGAATCAATAGCAGTTTAGAGGTGTTGGATATCTCATATAATAACTTCACTGGCAATATCCCACCTAATATCTGCTTTGGACAGCAATTAGTTAGGCTAATCTTGTCTTCAAATCAATTTCAAGGTGGTATACCACCTGACATAGGAAGATGCACAACACTTGTTAGGTTACGGCTTGATGGAAAAAACTTCACTGGACCTTTACCTCATTTTACAAGCAATAGTAGTCTCACCTTCGTGGACTTGAGTAAGAACAATATCAATGGAGCAATTCCATCATGTTTGGGAAACTGCACAAATCTTACCAATGTTATTTTGTCCCACAACAATCTTTTTGGTATCATACCCTTTGAGCTAGGAAACCTTGTGAACCTTCAAACGCTGAACCTTTCTCACAAAAAATTAGTAGGTCCTTTGCCACCTGAGTTGTCAAACTGCAAGAAAATGCAATACTTTGATGCTGGATTCAATTCTCTAAATGGTTCATTCCCATCGAGTTTAAGAACTTGGACAGGGTTGACAACATTAAATTTAAGGGACAATCATTTCACTGGTGGTATCCCAACTTTCTTATCAGAATATGAAGGCCTTTCTGATCTACATCTTGGAGGAAATTATTTTGGAGGCCAAATTCCTAGATCAATTGGTGAGTTGCACAATCTTTTGTATTTGTTGAATCTAAGTGCTAATGAGCTGACAGGTGAAATTCCTCCAGAGATTGGGAAACTGAAATCACTGCAAAGCCTCGATATTTCTCTTAACAACCTGACTGGAAAAATTGAAGTTCTTGAAGATCTATCTTCATTAACTGAACTCAATATTTCATACAATTCTTTTTCTGGTTCTCTTCCAGACACACTGGTGAACTTGCTCCATTCTTCTCCTCTATCATTCATGGGCCTTCCTGGCTTATGTATTAGATGTCTTCCATCGAATTGCTCCAAAAGTAACAGCTTGAAGCCATGTGATGAAAGAAATTCTACACATAAAAAAGGGCTGAGTAAAATTAAAGTTGTGTTGATAGCACTTGGATCTACACTACTTGTAACATTTCTGTTACTTGGTCTTGTTTACAGGCTACACTATAAGCAACATGTGAAGATTTTTCCTGAACAACGGTCATCAACTTTCCTCAAGAAGGTGATGAAGGTTACACAGAACCTAAATGATAGGCATATCATTGGGAGAGGAGCACATGGAGTTATTTACAAAGTTGAATTCGACCAAGACAATGTTTTTGTCATAAAGAAATTTCCCTTTTCAGACAACAATGATCAGATCACTAGCATGACCACAGAGATTAAAACCACTGCGATGATCAGGCACCGAAATCTAGTAAGAATAAAAAAGTTTTGGTTAAGAAAGGACTGTGGTCTAATTCTGTACAAGTACATGGAAAATGGAAGTCTTCATGATGTTCTGCATGAGAAGTATCCACCACCACCTTTAGAGTGGAATGTCCGCTATAAGATTGCAGTTGGAATTGCACATGGACTTGAATATCTTCATCATGATTGTCATCCTTTCATAGTGCACAGAGACATTAAACCAAAGAATATACTTTTGGATTCTGACATGGAGCCTCATATTGCTGATTTTGGCATTGCAAGGCTTCTAGACCATTCCTCTTCATTGCAATCTTTCTTTGTTCCTGGTACAGTTGGGTACATTGCACCAGAGAATGCTTATGCAGCAATGATAAGTACAAAGTCTGATGTGTATAGTTATGGAGTGTTGTTGCTAGAACTGATAAGCAGAAAGAAGGTGCTAGATGATCCTTTATTTGTGGAAGGAACAGATCTTGTGGAGTGGATCACATTTACCTGGGAAAAAACAAAAGGCATTGATGGAATTGTTGACTCAGGGCTTGAAGAGGAACTTTTGGCTTCAAATTTGAAGGAAGAAGTTGAACAAATGCTTCTTATGGCATTGAGATGTACTAAGAAACATCCAAGTGAGAGACCAACAATGAGAGAAGTGGTTTAA 3132 0.3825 MVRFNLVMLCLSVLLCVVNALNTDGVTLLSLQKHWTFVPPSINLSWNASDSTPCSWLGVQCDNNYNAISLNLSEHSISGLLGPEIGHLSHLQTLDLASNNFSGKIPPELGNCSLLQNLDLSYNSITGNIPDSLRNLHNLVSFSVRYNMLTGQIPEFLFQLQHLEDLFLNRNSLTGSIPMNVGNGTQILMLYLDGNQLSGGIPPSIGNCSKLVELYLDYNQLHRVLPESLNNLHSVVRLSLSNNRLEGTIPLFGSSICKSLQYLDLRHIPSSLGQLRELSILRIENNHLSGQIPSEIGNCRSLQQLMLNNNEFEGEIPSEFGKLSQLQDLRLHVNHLTGGIPELHVYYNNLSGEEPSELAELKQLKNLTLYHNQFSGVIPQSLGINSSLEVLDISYNNFTGNIPPNICFGQQLVRLILSSNQFQGGIPPDIGRCTTLVRLRLDGKNFTGPLPHFTSNSSLTFVDLSKNNINGAIPSCLGNCTNLTNVILSHNNLFGIIPFELGNLVNLQTLNLSHKKLVGPLPPELSNCKKMQYFDAGFNSLNGSFPSSLRTWTGLTTLNLRDNHFTGGIPTFLSEYEGLSDLHLGGNYFGGQIPRSIGELHNLLYLLNLSANELTGEIPPEIGKLKSLQSLDISLNNLTGKIEVLEDLSSLTELNISYNSFSGSLPDTLVNLLHSSPLSFMGLPGLCIRCLPSNCSKSNSLKPCDERNSTHKKGLSKIKVVLIALGSTLLVTFLLLGLVYRLHYKQHVKIFPEQRSSTFLKKVMKVTQNLNDRHIIGRGAHGVIYKVEFDQDNVFVIKKFPFSDNNDQITSMTTEIKTTAMIRHRNLVRIKKFWLRKDCGLILYKYMENGSLHDVLHEKYPPPPLEWNVRYKIAVGIAHGLEYLHHDCHPFIVHRDIKPKNILLDSDMEPHIADFGIARLLDHSSSLQSFFVPGTVGYIAPENAYAAMISTKSDVYSYGVLLLELISRKKVLDDPLFVEGTDLVEWITFTWEKTKGIDGIVDSGLEEELLASNLKEEVEQMLLMALRCTKKHPSERPTMREVV* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1725 1043 Pfam Leucine rich repeat 604 660 IPR001611 GO:0005515
Pvu11g1725 1043 ProSitePatterns Protein kinases ATP-binding region signature. 776 799 IPR017441 GO:0005524
Pvu11g1725 1043 SUPERFAMILY Protein kinase-like (PK-like) 754 1043 IPR011009 -
Pvu11g1725 1043 Gene3D Phosphorylase Kinase; domain 1 738 846 - -
Pvu11g1725 1043 Gene3D Ribonuclease Inhibitor 183 266 IPR032675 -
Pvu11g1725 1043 Gene3D Ribonuclease Inhibitor 267 344 IPR032675 -
Pvu11g1725 1043 Gene3D Ribonuclease Inhibitor 345 699 IPR032675 -
Pvu11g1725 1043 Gene3D Transferase(Phosphotransferase) domain 1 847 1043 - -
Pvu11g1725 1043 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 266 601 - -
Pvu11g1725 1043 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 596 642 - -
Pvu11g1725 1043 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 645 1043 - -
Pvu11g1725 1043 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 8 256 - -
Pvu11g1725 1043 SUPERFAMILY RNI-like 315 681 - -
Pvu11g1725 1043 ProSiteProfiles Leucine-rich repeat profile. 627 649 IPR001611 GO:0005515
Pvu11g1725 1043 ProSiteProfiles Protein kinase domain profile. 770 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1725 1043 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Pvu11g1725 1043 SMART serkin_6 770 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1725 1043 ProSitePatterns Serine/Threonine protein kinases active-site signature. 892 904 IPR008271 GO:0004672|GO:0006468
Pvu11g1725 1043 Pfam Protein kinase domain 773 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1725 1043 SUPERFAMILY L domain-like 43 341 - -
Pvu11g1725 1043 Coils Coil 628 648 - -
Pvu11g1725 1043 SMART LRR_typ_2 386 409 IPR003591 -
Pvu11g1725 1043 SMART LRR_typ_2 275 299 IPR003591 -
Pvu11g1725 1043 SMART LRR_typ_2 600 625 IPR003591 -
Pvu11g1725 1043 SMART LRR_typ_2 648 671 IPR003591 -
Pvu11g1725 1043 SMART LRR_typ_2 208 231 IPR003591 -
Pvu11g1725 1043 SMART LRR_typ_2 361 384 IPR003591 -
Pvu11g1725 1043 SMART LRR_typ_2 160 184 IPR003591 -
Pvu11g1725 1043 SMART LRR_typ_2 88 112 IPR003591 -
Pvu11g1725 1043 SMART LRR_typ_2 232 254 IPR003591 -
Pvu11g1725 1043 SMART LRR_typ_2 504 528 IPR003591 -
Pvu11g1725 1043 Gene3D Ribonuclease Inhibitor 21 182 IPR032675 -
Pvu11g1725 1043 PANTHER OS08G0446200 PROTEIN 596 642 - -
Pvu11g1725 1043 PANTHER OS08G0446200 PROTEIN 266 601 - -
Pvu11g1725 1043 PANTHER OS08G0446200 PROTEIN 8 256 - -
Pvu11g1725 1043 PANTHER OS08G0446200 PROTEIN 645 1043 - -
Pvu11g1725 1043 Pfam Leucine Rich Repeat 90 112 IPR001611 GO:0005515
Pvu11g1725 1043 Pfam Leucine Rich Repeat 115 136 IPR001611 GO:0005515
Pvu11g1725 1043 Pfam Leucine Rich Repeat 387 407 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1725 Pvu-Chr11 43582885 43586311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1725 18 1043 Receptor kinase-like Gene Family AT1G73080 47.097 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu11g1725 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1725 - - vun:114170650 1709.5