Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1710 ATGACCGGCAAAGAAATCCTTCATAAGATGAAGGAAAAAGTTTTGGGCCCATCTGATTCTGATTCAGGTAAAGGAAAGAGCAAGATGAAGAAGCACATAACTCATGGCTTTCACTTGGTAAAGGGAAGAGCAGGTCATGCCATGGAAGACTATGTTGTTGCTCAGTTTAAGCAAGTTGATAACAATGAATTGGGCTTATTTGCAATATTCGATGGCCACTCAGGTCAAAGTGTACCTGATTACTTGAAAACTCATTTGTTTGATACCATCTTGAAAGAGCCTAACTTCTGGACAGAACCTGCTGAGGCTGTCAAGAGAGCATATAGTATAACTGATTCCACTATTTTAGACAAATCAGGTGAATTGGGTAGAGGAGGTTCAACTGCAGTTACAGCAATATTGATCAACTGTCAGAAGTTAGTAGTGGCCAATATTGGGGATTCCAGGGCTGTCTTGTGCAAGAATGGCCAGGCCAAACAACTATCAGTGGATCATGAACCAAGTGTAGAAAGTGAGGATATAAAAAACAGAGGTGGTTTTGTGTCAAACTTCCCAGGGGACGTTCCACGAGTTGATGGTCAGTTGGCAGTGTCAAGGGCATTCGGTGACAAAAGCCTGAAGATACACTTGAGCTCAGAACCACATGTGATTGTGGAGATGATAGGCGATGATGCAGAGTTTATTATCTTAGCCAGTGATGGTTTATGGAAGGTAATGACAAATCAAGAAGCAGTTGAAGCAATAAGGGATGTTAAGGATGCTCGGTCTGCGGCAAAGCTCCTTACTGAAGAAGCACGTAACAGGAAAAGCTCAGATGATATCTCTTGTGTTGTTGTGAAATTGCAGTGA 849 0.4217 MTGKEILHKMKEKVLGPSDSDSGKGKSKMKKHITHGFHLVKGRAGHAMEDYVVAQFKQVDNNELGLFAIFDGHSGQSVPDYLKTHLFDTILKEPNFWTEPAEAVKRAYSITDSTILDKSGELGRGGSTAVTAILINCQKLVVANIGDSRAVLCKNGQAKQLSVDHEPSVESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHLSSEPHVIVEMIGDDAEFIILASDGLWKVMTNQEAVEAIRDVKDARSAAKLLTEEARNRKSSDDISCVVVKLQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1710 282 Gene3D - 28 282 IPR036457 -
Pvu11g1710 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Pvu11g1710 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 281 - -
Pvu11g1710 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Pvu11g1710 282 CDD PP2Cc 35 281 IPR001932 -
Pvu11g1710 282 SMART PP2C_4 24 279 IPR001932 -
Pvu11g1710 282 MobiDBLite consensus disorder prediction 8 27 - -
Pvu11g1710 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Pvu11g1710 282 MobiDBLite consensus disorder prediction 8 28 - -
Pvu11g1710 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1710 Pvu-Chr11 43286866 43290903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1710 1 282 PP2C-type Phosphatase Gene Family AT3G15260 75.433 2.10e-161 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1710 K17506 - gmx:100787942 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1710 11 43286866 43290903 Pvu11g1710 11 43286866 43290903 ECH
Pvu5g0766 5 12926594 12929730 Pvu11g1710 11 43286866 43290903 PCT