Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1708 ATGGCTGACATAGCGGGTCTGGTTGAGGCTGCAGGGGCAAGATTTAGTTCGTTGGAGCTTATTGGGCAGGGATCATTCGGCGACGTGTATAAAGGGTTTGACAAGGAGCTAAACAAAGAAGTTGCTATCAAAGTGATTGATTTGGAAGAATC 152 0.4605 MADIAGLVEAAGARFSSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEE 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1708 50 SUPERFAMILY Protein kinase-like (PK-like) 11 49 IPR011009 -
Pvu11g1708 50 Gene3D Phosphorylase Kinase; domain 1 2 50 - -
Pvu11g1708 50 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 50 - -
Pvu11g1708 50 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pvu11g1708 50 ProSiteProfiles Protein kinase domain profile. 15 50 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1708 50 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1708 Pvu-Chr11 43231663 43233978 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1708 1 48 MAP Kinase Kinase Kinase Kinase AT3G15220 83.333 1.95e-21 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pvu11g1708 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1708 K08838 - pvu:PHAVU_011G1647000 98.5969